RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 ADH1AP07327 375 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 YARSP54577 528 aaKnown RBP22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 NCKAP1LP55160 1127 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 OSTNP61366 133 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 GLRA4Q5JXX5 417 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 TMEM31Q5JXX7 168 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 KANK3Q6NY19 840 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 GPR65Q8IYL9 337 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 LARP4BQ92615 738 aaKnown RBP22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 ZBTB45Q96K62 511 aaPredicted RBP22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 CLIC6Q96NY7 704 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 PPP1R10Q96QC0 940 aaKnown RBP22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 LRFN3Q9BTN0 628 aa22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 TOPORSQ9NS56 1045 aaPredicted RBP22.36■■□□□ 1.17
UBE2D4-207ENST00000450743 SF3B1O75533 1304 aaKnown RBP eCLIP22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 TOM1L1O75674 476 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 KIF4AO95239 1232 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 KRT18P05783 430 aaKnown RBP22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 DDIT3P35638 169 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 MTHFRP42898 656 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 ZNF131P52739 623 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 SLC39A14Q15043 492 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 XKR4Q5GH76 650 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 ALKAL1Q6UXT8 129 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 ZPBP2Q6X784 338 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 HAUS6Q7Z4H7 955 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 HSCBQ8IWL3 235 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 HASPINQ8TF76 798 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 KCNN1Q92952 543 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 NECTIN4Q96NY8 510 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 CCDC39Q9UFE4 941 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 MUTYHQ9UIF7 546 aa22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 MORC2Q9Y6X9 1032 aaPredicted RBP22.35■■□□□ 1.17
UBE2D4-207ENST00000450743 TECTAO75443 2155 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 SMIM28A0A1B0GU29 152 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 FAM86C2PA6NEL3 165 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 FAM13AO94988 1023 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 WEE2P0C1S8 567 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 HERC4Q5GLZ8 1057 aaPredicted RBP22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 MYCT1Q8N699 235 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 RIN2Q8WYP3 895 aaPredicted RBP22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 RIPOR3Q96MK2 946 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 ACAP3Q96P50 834 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 POMKQ9H5K3 350 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 SFXN1Q9H9B4 322 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 PARVGQ9HBI0 331 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 ANKFY1Q9P2R3 1169 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 TRIOO75962 3097 aa22.34■■□□□ 1.17
UBE2D4-207ENST00000450743 DOCK6Q96HP0 2047 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 HARSP12081 509 aaKnown RBP22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 NOLC1Q14978 699 aaKnown RBP eCLIP22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 ATAT1Q5SQI0 421 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 FAM171A1Q5VUB5 890 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 TMC5Q6UXY8 1006 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 FNIP2Q9P278 1114 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 STK17AQ9UEE5 414 aa22.33■■□□□ 1.17
UBE2D4-207ENST00000450743 SPDYE4A6NLX3 237 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 TRAK2O60296 914 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 GLUD1P00367 558 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 COL9A1P20849 921 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 SCP2P22307 547 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 TXLNAP40222 546 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 NASPP49321 788 aaPredicted RBP22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 RTP2Q5QGT7 225 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 DCLRE1AQ6PJP8 1040 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 KRI1Q8N9T8 703 aaKnown RBP22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 FEZF2Q8TBJ5 459 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 SNX27Q96L92 541 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 UROC1Q96N76 676 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 TTPALQ9BTX7 342 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 ZHX3Q9H4I2 956 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 MAN1C1Q9NR34 630 aa22.32■■□□□ 1.16
UBE2D4-207ENST00000450743 ANK1P16157 1881 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 TMEM189-UBE2V1I3L0A0 370 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 K7ENM7 598 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 CLDN3O15551 220 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 TBCAO75347 108 aaKnown RBP22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 KCNE1P15382 129 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 CLCNKBP51801 687 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 CREMQ03060 361 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 SOX4Q06945 474 aaPredicted RBP22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 MCL1Q07820 350 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 ELAVL2Q12926 359 aaKnown RBP22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 UPP1Q16831 310 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 RRAGBQ5VZM2 374 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 PRSS55Q6UWB4 352 aaPredicted RBP22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 GPR149Q86SP6 731 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 BICD1Q96G01 975 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 ZMAT2Q96NC0 199 aaKnown RBP22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 GOLGA2P5Q9HBQ8 144 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 SLC38A7Q9NVC3 462 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 DPP7Q9UHL4 492 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 TBX20Q9UMR3 447 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 NR2E1Q9Y466 385 aa22.31■■□□□ 1.16
UBE2D4-207ENST00000450743 MEFVO15553 781 aaPredicted RBP22.3■■□□□ 1.16
UBE2D4-207ENST00000450743 B3GAT3O94766 335 aa22.3■■□□□ 1.16
UBE2D4-207ENST00000450743 C1RP00736 705 aa22.3■■□□□ 1.16
UBE2D4-207ENST00000450743 HSP90AA1P07900 732 aaKnown RBP22.3■■□□□ 1.16
UBE2D4-207ENST00000450743 RPL17P18621 184 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms