RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ZNF711Q9Y462 761 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 SLIT1O75093 1534 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 MST1RQ04912 1400 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 ATP9AO75110 1047 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 RAD17O75943 681 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 GH2P01242 217 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 GHRP10912 638 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 F5H6K3 240 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 ATP4AP20648 1035 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 KLRC3Q07444 240 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 CUL3Q13618 768 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 PDIK1LQ8N165 341 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 HSPH1Q92598 858 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 SMYD2Q9NRG4 433 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 FAF1Q9UNN5 650 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 IGSF9BQ9UPX0 1349 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 SYNJ2BP-COX16A0A087WUM0 186 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 LPXNO60711 386 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 AGGF1Q8N302 714 aaeCLIP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 NMD3Q96D46 503 aaKnown RBP13.16□□□□□ -0.3
UBE3B-204ENST00000449510 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 COX16Q9P0S2 106 aa13.16□□□□□ -0.3
UBE3B-204ENST00000449510 PFASO15067 1338 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 ANKRD63C9JTQ0 380 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 LAMB3Q13751 1172 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
UBE3B-204ENST00000449510 C3orf62Q6ZUJ4 267 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 ACCSQ96QU6 501 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 LXNQ9BS40 222 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 TMEM150BA6NC51 233 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 RTN2O75298 545 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 TTC4O95801 387 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 GSTA1P08263 222 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
UBE3B-204ENST00000449510 PDE1BQ01064 536 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 GANQ9H2C0 597 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
UBE3B-204ENST00000449510 PPIP5K2O43314 1243 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 ATP5HO75947 161 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 ITIH2P19823 946 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 PTDSS1P48651 473 aaKnown RBP13.15□□□□□ -0.31
UBE3B-204ENST00000449510 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.31
UBE3B-204ENST00000449510 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.31
UBE3B-204ENST00000449510 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.31
UBE3B-204ENST00000449510 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.31
UBE3B-204ENST00000449510 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 COPEO14579 308 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 BANF1O75531 89 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 FAM43BQ6ZT52 329 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 C3orf20Q8ND61 904 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 HAS1Q92839 578 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 PGM2Q96G03 612 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 CEP170P1Q96L14 293 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 FAM111AQ96PZ2 611 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 ABCB11O95342 1321 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 CREB3O43889 395 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms