RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FTHL17Q9BXU8 183 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 TMEM117Q9H0C3 514 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 PLCB1Q9NQ66 1216 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 ATP11BQ9Y2G3 1177 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 MKI67P46013 3256 aaKnown RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 PTPRJQ12913 1337 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 NBNO60934 754 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 CXCL10P02778 98 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 DLATP10515 647 aaKnown RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 ZSCAN20P17040 1043 aaPredicted RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 TRIM14Q14142 442 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 EXOC3L4Q17RC7 722 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 ZACNQ401N2 412 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 PLEKHG4Q58EX7 1191 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 XKR4Q5GH76 650 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 ALKAL1Q6UXT8 129 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 GBP6Q6ZN66 633 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 SMG8Q8ND04 991 aaKnown RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 ZNF516Q92618 1163 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 POP1Q99575 1024 aaKnown RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 TTYH3Q9C0H2 523 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 WNT8AQ9H1J5 351 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 NXF3Q9H4D5 531 aaKnown RBP20.88■□□□□ 0.93
RPS28-202ENST00000449223 FAM105AQ9NUU6 356 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 IPPQ9Y573 584 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.88■□□□□ 0.93
RPS28-202ENST00000449223 TRIP11Q15643 1979 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 UMODL1Q5DID0 1318 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 A0A0U1RQF3 1178 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 MGEA5O60502 916 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 EN2P19622 333 aaPredicted RBP20.87■□□□□ 0.93
RPS28-202ENST00000449223 GCLMP48507 274 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 OSTNP61366 133 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 MYL7Q01449 175 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 CETN1Q12798 172 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 EPC2Q52LR7 807 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 DPY19L2P1Q6NXN4 242 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 SV2AQ7L0J3 742 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 MRPL10Q7Z7H8 261 aaKnown RBP20.87■□□□□ 0.93
RPS28-202ENST00000449223 DRC7Q8IY82 874 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 APBB2Q92870 758 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 SNX27Q96L92 541 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 NUP58Q9BVL2 599 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 TOPORSQ9NS56 1045 aaPredicted RBP20.87■□□□□ 0.93
RPS28-202ENST00000449223 SNTG2Q9NY99 539 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 DERAQ9Y315 318 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 C2CD2Q9Y426 696 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 PCDHB2Q9Y5E7 798 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 SCN5AQ14524 2016 aa20.87■□□□□ 0.93
RPS28-202ENST00000449223 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 C4BPAP04003 597 aaKnown RBP20.86■□□□□ 0.93
RPS28-202ENST00000449223 SKIP12755 728 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 TNNI1P19237 187 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 PON1P27169 355 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 PTPN21Q16825 1174 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 LMO3Q8TAP4 145 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 RGS18Q9NS28 235 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 GCNT4Q9P109 453 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 CNTN3Q9P232 1028 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 FBXL5Q9UKA1 691 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 DAAM1Q9Y4D1 1078 aa20.86■□□□□ 0.93
RPS28-202ENST00000449223 LACTBL1A8MY62 500 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 GOLGA6L6A8MZA4 724 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 KIAA0355O15063 1070 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 RECQL4O94761 1208 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 GYPCP04921 128 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 RFC2P35250 354 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 YARSP54577 528 aaKnown RBP20.85■□□□□ 0.93
RPS28-202ENST00000449223 EFCAB13Q8IY85 973 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 EDEM3Q9BZQ6 932 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 TSPYL2Q9H2G4 693 aaPredicted RBP20.85■□□□□ 0.93
RPS28-202ENST00000449223 TMEM39AQ9NV64 488 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 TET1Q8NFU7 2136 aa20.85■□□□□ 0.93
RPS28-202ENST00000449223 A0A1W2PQJ5 194 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 DEKP35659 375 aaKnown RBP20.84■□□□□ 0.93
RPS28-202ENST00000449223 GSDMDP57764 484 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 DUOXA2Q1HG44 320 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 TDRD10Q5VZ19 366 aaKnown RBP20.84■□□□□ 0.93
RPS28-202ENST00000449223 TRIM65Q6PJ69 517 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 HACE1Q8IYU2 909 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 SPC24Q8NBT2 197 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 FBXL13Q8NEE6 735 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 OR5B17Q8NGF7 314 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 ADAM2Q99965 735 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 CRACR2AQ9BSW2 395 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 HES2Q9Y543 173 aa20.84■□□□□ 0.93
RPS28-202ENST00000449223 KLK7P49862 253 aa20.83■□□□□ 0.93
RPS28-202ENST00000449223 EHBP1Q8NDI1 1231 aa20.83■□□□□ 0.93
RPS28-202ENST00000449223 SIX2Q9NPC8 291 aa20.83■□□□□ 0.93
RPS28-202ENST00000449223 C9IYK1 514 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 ZC3H11AO75152 810 aaKnown RBP eCLIP20.83■□□□□ 0.92
RPS28-202ENST00000449223 NOL4O94818 638 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 KCNE1P15382 129 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 ATF7P17544 494 aaPredicted RBP20.83■□□□□ 0.92
RPS28-202ENST00000449223 TRIM21P19474 475 aaKnown RBP20.83■□□□□ 0.92
RPS28-202ENST00000449223 SLC9A1P19634 815 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 CYP2C18P33260 490 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 FAM189BP81408 668 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 ARID5BQ14865 1188 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms