RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 BCAR1P56945 870 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 NT5DC1Q5TFE4 455 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 TAS1R3Q7RTX0 852 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 DDX12PQ92771 950 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 SNX27Q96L92 541 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 RIPOR3Q96MK2 946 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 ZFP42Q96MM3 310 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
USP39-206ENST00000448971 FAM86C1Q9NVL1 165 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 KANSL3Q9P2N6 904 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 TNFSF13BQ9Y275 285 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 WDR87Q6ZQQ6 2873 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 CARNS1A5YM72 827 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 ARL5CA6NH57 179 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 RECQL4O94761 1208 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 MAPTP10636 758 aaKnown RBP15.96■□□□□ 0.15
USP39-206ENST00000448971 PYGBP11216 843 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 IDEP14735 1019 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 MATR3P43243 847 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP39-206ENST00000448971 AFF1P51825 1210 aaKnown RBP15.96■□□□□ 0.15
USP39-206ENST00000448971 ZNF131P52739 623 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 AXDND1Q5T1B0 1012 aaPredicted RBP15.96■□□□□ 0.15
USP39-206ENST00000448971 LLGL2Q6P1M3 1020 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 HAUS6Q7Z4H7 955 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 SFR1Q86XK3 245 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 SLC39A11Q8N1S5 342 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 MRPL43Q8N983 215 aaKnown RBP15.96■□□□□ 0.15
USP39-206ENST00000448971 TMEM169Q96HH4 297 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 TCHPQ9BT92 498 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 CDT1Q9H211 546 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 CUEDC2Q9H467 287 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 NRDE2Q9H7Z3 1164 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 SNTG2Q9NY99 539 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 SPG21Q9NZD8 308 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 KLK14Q9P0G3 267 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 DNAJB4Q9UDY4 337 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 MYH11P35749 1972 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 ZMYM2Q9UBW7 1377 aa15.96■□□□□ 0.15
USP39-206ENST00000448971 MYMKA6NI61 221 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 RIOK3O14730 519 aaKnown RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 HNRNPDLO14979 420 aaKnown RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 SRGAP2BP0DMP2 458 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 CA8P35219 290 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 NUCB2P80303 420 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 KRT17Q04695 432 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 GRIK3Q13003 919 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 TPRNQ4KMQ1 711 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 MPZL3Q6UWV2 235 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 TMC7Q7Z402 723 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 ZBTB33Q86T24 672 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 ZNF280BQ86YH2 543 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 IQUBQ8NA54 791 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 KREMEN2Q8NCW0 462 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 LEO1Q8WVC0 666 aaPredicted RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 ACO2Q99798 780 aaKnown RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 NTPCRQ9BSD7 190 aaKnown RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
USP39-206ENST00000448971 IRF2BPLQ9H1B7 796 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 ADAM7Q9H2U9 754 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 ENTPD7Q9NQZ7 604 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
USP39-206ENST00000448971 C2orf71A6NGG8 1288 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 H0Y858 1186 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 B4GALT3O60512 393 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 GFRA3O60609 400 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 SCP2P22307 547 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 SP100P23497 879 aaPredicted RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 ABCD1P33897 745 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 ANP32AP39687 249 aaKnown RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 SLC11A1P49279 550 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 LIG4P49917 911 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 YARSP54577 528 aaKnown RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 NOLC1Q14978 699 aaKnown RBP eCLIP15.94■□□□□ 0.14
USP39-206ENST00000448971 E2F4Q16254 413 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 RESP18Q5W5W9 173 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 CEP120Q8N960 986 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 STAMQ92783 540 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 CASP10Q92851 521 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 ATOH1Q92858 354 aaPredicted RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 TMEM175Q9BSA9 504 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 LRRC27Q9C0I9 530 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 SCAND2PQ9GZW5 306 aaPredicted RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 POMKQ9H5K3 350 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 PRG3Q9Y2Y8 225 aaPredicted RBP15.94■□□□□ 0.14
USP39-206ENST00000448971 HCFC2Q9Y5Z7 792 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 PLXNA3P51805 1871 aa15.94■□□□□ 0.14
USP39-206ENST00000448971 C2CD4DB7Z1M9 353 aa15.93■□□□□ 0.14
USP39-206ENST00000448971 PROB1E7EW31 1015 aa15.93■□□□□ 0.14
USP39-206ENST00000448971 INPPL1O15357 1258 aa15.93■□□□□ 0.14
USP39-206ENST00000448971 POLR2DO15514 142 aaKnown RBP15.93■□□□□ 0.14
USP39-206ENST00000448971 CLASP2O75122 1294 aaKnown RBP15.93■□□□□ 0.14
USP39-206ENST00000448971 NR1I2O75469 434 aa15.93■□□□□ 0.14
USP39-206ENST00000448971 TOM1L1O75674 476 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms