RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DPP7Q9UHL4 492 aa19.42■□□□□ 0.7
DDX56-207ENST00000448192 KCNG1Q9UIX4 513 aa19.42■□□□□ 0.7
DDX56-207ENST00000448192 MYO10Q9HD67 2058 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 SLC26A4O43511 780 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 LONP1P36776 959 aaKnown RBP19.41■□□□□ 0.7
DDX56-207ENST00000448192 GRM5P41594 1212 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 ARSHQ5FYA8 562 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 PRSS55Q6UWB4 352 aaPredicted RBP19.41■□□□□ 0.7
DDX56-207ENST00000448192 MPZL3Q6UWV2 235 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 TRIM67Q6ZTA4 783 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 HFE2Q6ZVN8 426 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 CEP57Q86XR8 500 aa19.41■□□□□ 0.7
DDX56-207ENST00000448192 PPP1R10Q96QC0 940 aaKnown RBP19.41■□□□□ 0.7
DDX56-207ENST00000448192 TOPORSQ9NS56 1045 aaPredicted RBP19.41■□□□□ 0.7
DDX56-207ENST00000448192 MCF2P10911 925 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 SYT1P21579 422 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 CREMQ03060 361 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 KARSQ15046 597 aaKnown RBP19.4■□□□□ 0.7
DDX56-207ENST00000448192 PTPN21Q16825 1174 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 RTP2Q5QGT7 225 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 GPBP1Q86WP2 473 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 GPR65Q8IYL9 337 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 TDRD5Q8NAT2 981 aaKnown RBP19.4■□□□□ 0.7
DDX56-207ENST00000448192 TMEM161BQ8NDZ6 487 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 ZBTB45Q96K62 511 aaPredicted RBP19.4■□□□□ 0.7
DDX56-207ENST00000448192 TTPALQ9BTX7 342 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 FNIP2Q9P278 1114 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 LARSQ9P2J5 1176 aaKnown RBP19.4■□□□□ 0.7
DDX56-207ENST00000448192 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 VWA8A3KMH1 1905 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 TECTAO75443 2155 aa19.4■□□□□ 0.7
DDX56-207ENST00000448192 SMIM28A0A1B0GU29 152 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 TMEM221A6NGB7 291 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 M0R296 226 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 TGM5O43548 720 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 KRT18P05783 430 aaKnown RBP19.39■□□□□ 0.69
DDX56-207ENST00000448192 MAPTP10636 758 aaKnown RBP19.39■□□□□ 0.69
DDX56-207ENST00000448192 PLCG1P19174 1290 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 PROZP22891 400 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 CLCNKBP51801 687 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 FAM173BQ6P4H8 233 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 LRRC15Q8TF66 581 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 ACAP3Q96P50 834 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 REEP2Q9BRK0 252 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 GOLGA2P5Q9HBQ8 144 aa19.39■□□□□ 0.69
DDX56-207ENST00000448192 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 ABLIM1O14639 778 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 RFPL2O75678 378 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 B3GAT3O94766 335 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 MARCKSP29966 332 aaPredicted RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 MATR3P43243 847 aaKnown RBP eCLIP19.38■□□□□ 0.69
DDX56-207ENST00000448192 CEBPZQ03701 1054 aaKnown RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 ELAVL2Q12926 359 aaKnown RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 RESTQ13127 1097 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 MCM6Q14566 821 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 PSMD5Q16401 504 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 DCLRE1AQ6PJP8 1040 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 C15orf39Q6ZRI6 1047 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 CCDC149Q6ZUS6 474 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 KREMEN2Q8NCW0 462 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 CMASQ8NFW8 434 aaPredicted RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 RAD54LQ92698 747 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 PBXIP1Q96AQ6 731 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 ACSF2Q96CM8 615 aaPredicted RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 FAM122AQ96E09 287 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 INTS4Q96HW7 963 aaKnown RBP19.38■□□□□ 0.69
DDX56-207ENST00000448192 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 UROC1Q96N76 676 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 PLEKHA4Q9H4M7 779 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 BLOC1S4Q9NUP1 217 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 LIMD1Q9UGP4 676 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 ODF2LQ9ULJ1 636 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
DDX56-207ENST00000448192 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
DDX56-207ENST00000448192 H0YCG3 227 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 TOM1L1O75674 476 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 FAM13AO94988 1023 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 IGFBP6P24592 240 aaPredicted RBP19.37■□□□□ 0.69
DDX56-207ENST00000448192 SIGLEC14Q08ET2 396 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 NOLC1Q14978 699 aaKnown RBP eCLIP19.37■□□□□ 0.69
DDX56-207ENST00000448192 PTPAQ15257 358 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 UPP1Q16831 310 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 SEZ6Q53EL9 994 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 SPECC1Q5M775 1068 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 ALKAL1Q6UXT8 129 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 ZPBP2Q6X784 338 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 HAUS6Q7Z4H7 955 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 ZDHHC14Q8IZN3 488 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 PLCD3Q8N3E9 789 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 MYCT1Q8N699 235 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 LNX1Q8TBB1 728 aaPredicted RBP19.37■□□□□ 0.69
DDX56-207ENST00000448192 HDAC7Q8WUI4 952 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 PIK3R5Q8WYR1 880 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 BICD1Q96G01 975 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 EPSTI1Q96J88 318 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 SNX27Q96L92 541 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 ZHX3Q9H4I2 956 aa19.37■□□□□ 0.69
DDX56-207ENST00000448192 SLC38A7Q9NVC3 462 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms