RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 DDX10Q13206 875 aaKnown RBP7.03□□□□□ -1.28
USP49-205ENST00000448078 GRB14Q14449 540 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 COG2Q14746 738 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 SLC9A5Q14940 896 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 TCERG1LQ5VWI1 586 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 MFSD5Q6N075 450 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 CATSPERGQ6ZRH7 1159 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 DPH6Q7L8W6 267 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 CERS3Q8IU89 383 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 TMEM151BQ8IW70 566 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 RPUSD2Q8IZ73 545 aaKnown RBP7.03□□□□□ -1.28
USP49-205ENST00000448078 ABRAQ8N0Z2 381 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 MB21D1Q8N884 522 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 RCBTB1Q8NDN9 531 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 GLT1D1Q96MS3 346 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 DEPDC7Q96QD5 511 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 UIMC1Q96RL1 719 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 MTA3Q9BTC8 594 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 GCM1Q9NP62 436 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 DDX4Q9NQI0 724 aaKnown RBP7.03□□□□□ -1.28
USP49-205ENST00000448078 STARD7Q9NQZ5 370 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 CNPY2Q9Y2B0 182 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 DDX60LQ5H9U9 1706 aaKnown RBP7.03□□□□□ -1.28
USP49-205ENST00000448078 ATRNL1Q5VV63 1379 aa7.03□□□□□ -1.28
USP49-205ENST00000448078 PDS5AQ29RF7 1337 aaKnown RBP7.02□□□□□ -1.28
USP49-205ENST00000448078 BLACEA4D250 179 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 SMIM22K7EJ46 135 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 ERC2O15083 957 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 PPP1R11O60927 126 aaPredicted RBP7.02□□□□□ -1.29
USP49-205ENST00000448078 IGSF3O75054 1194 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 DGKIO75912 1065 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 CYBAP13498 195 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 NCAM1P13591 858 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 ALADP13716 330 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 ADORA2AP29274 412 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 LIMS1P48059 325 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 RASGRF1Q13972 1273 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 PLS1Q14651 629 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 SSPNQ14714 243 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 ANO1Q5XXA6 986 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 ANKRD33Q7Z3H0 272 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 MILR1Q7Z6M3 343 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 PCSK9Q8NBP7 692 aaKnown RBP7.02□□□□□ -1.29
USP49-205ENST00000448078 SHCBP1Q8NEM2 672 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 KLHDC4Q8TBB5 520 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 PWWP2AQ96N64 755 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 NEUROD6Q96NK8 337 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 SEZ6LQ9BYH1 1024 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 CCDC113Q9H0I3 377 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 SIL1Q9H173 461 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 KCNH6Q9H252 994 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 FLRT1Q9NZU1 646 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.02□□□□□ -1.29
USP49-205ENST00000448078 DNAH12Q6ZR08 3092 aa7.02□□□□□ -1.29
USP49-205ENST00000448078 KIF28PB7ZC32 967 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 DLX3O60479 287 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 SLC25A27O95847 323 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 KRT1P04264 644 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 PHKA1P46020 1223 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 AFF3P51826 1226 aaKnown RBP7.01□□□□□ -1.29
USP49-205ENST00000448078 JAG1P78504 1218 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 KCTD2Q14681 263 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 NAA16Q6N069 864 aaPredicted RBP7.01□□□□□ -1.29
USP49-205ENST00000448078 LBX2Q6XYB7 198 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ANKRD44Q8N8A2 993 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 SEC14L1Q92503 715 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 KAZALD1Q96I82 304 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 SNX27Q96L92 541 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 EPHX3Q9H6B9 360 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 FAM184BQ9ULE4 1060 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ZBTB21Q9ULJ3 1066 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 SLC4A7Q9Y6M7 1214 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ELP1O95163 1332 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ZNF521Q96K83 1311 aa7.01□□□□□ -1.29
USP49-205ENST00000448078 ALPK3Q96L96 1907 aa7□□□□□ -1.29
USP49-205ENST00000448078 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
USP49-205ENST00000448078 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
USP49-205ENST00000448078 GH2P01242 217 aa7□□□□□ -1.29
USP49-205ENST00000448078 UQCRFS1P1P0C7P4 283 aa7□□□□□ -1.29
USP49-205ENST00000448078 UBTFL1P0CB47 393 aaPredicted RBP7□□□□□ -1.29
USP49-205ENST00000448078 FGFR1P11362 822 aa7□□□□□ -1.29
USP49-205ENST00000448078 AKR1A1P14550 325 aa7□□□□□ -1.29
USP49-205ENST00000448078 PMLP29590 882 aa7□□□□□ -1.29
USP49-205ENST00000448078 COPB2P35606 906 aa7□□□□□ -1.29
USP49-205ENST00000448078 MRE11P49959 708 aa7□□□□□ -1.29
USP49-205ENST00000448078 ACLYP53396 1101 aa7□□□□□ -1.29
USP49-205ENST00000448078 EPHB4P54760 987 aa7□□□□□ -1.29
USP49-205ENST00000448078 RHBDL3P58872 404 aa7□□□□□ -1.29
USP49-205ENST00000448078 TIMM10P62072 90 aa7□□□□□ -1.29
USP49-205ENST00000448078 ABCB5Q2M3G0 1257 aa7□□□□□ -1.29
USP49-205ENST00000448078 CERKLQ49MI3 558 aaPredicted RBP7□□□□□ -1.29
USP49-205ENST00000448078 TMEM240Q5SV17 173 aa7□□□□□ -1.29
USP49-205ENST00000448078 PRAMEF19Q5SWL8 479 aa7□□□□□ -1.29
USP49-205ENST00000448078 SLC35F1Q5T1Q4 408 aa7□□□□□ -1.29
USP49-205ENST00000448078 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms