RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RAB27AP51159 221 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 WNT7BP56706 349 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 PPP3CAQ08209 521 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 PTPN21Q16825 1174 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 SLC10A6Q3KNW5 377 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 FAM43BQ6ZT52 329 aaPredicted RBP21.17■□□□□ 0.98
SGCE-207ENST00000447873 DEFB128Q7Z7B8 93 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 DRC7Q8IY82 874 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 APBB2Q92870 758 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 PARP2Q9UGN5 583 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 TET1Q8NFU7 2136 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 TRIP11Q15643 1979 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 A0A0U1RQF3 1178 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 LACTBL1A8MY62 500 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 N4BP1O75113 896 aaKnown RBP21.16■□□□□ 0.98
SGCE-207ENST00000447873 RECQL4O94761 1208 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 SKIP12755 728 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 AKAP5P24588 427 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 GTF2H1P32780 548 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 CLDN10P78369 228 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
SGCE-207ENST00000447873 CGRRF1Q99675 332 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 ASB7Q9H672 318 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 PLEKHA5Q9HAU0 1116 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 RGS18Q9NS28 235 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 PRKAG2Q9UGJ0 569 aa21.16■□□□□ 0.98
SGCE-207ENST00000447873 RALGAPA2Q2PPJ7 1873 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 TTC26A0AVF1 554 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 ITGA4P13612 1032 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 MXI1P50539 228 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CETN1Q12798 172 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CBWD6Q4V339 395 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CBWD3Q5JTY5 395 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CBWD5Q5RIA9 395 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 LMBRD2Q68DH5 695 aaPredicted RBP21.15■□□□□ 0.98
SGCE-207ENST00000447873 WDR49Q8IV35 697 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CD302Q8IX05 232 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 TMEM8AQ9HCN3 771 aa21.15■□□□□ 0.98
SGCE-207ENST00000447873 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 MEFVO15553 781 aaPredicted RBP21.14■□□□□ 0.98
SGCE-207ENST00000447873 ZNF623O75123 536 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 IBSPP21815 317 aaPredicted RBP21.14■□□□□ 0.98
SGCE-207ENST00000447873 ITGB8P26012 769 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 CDC25BP30305 580 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 AP3M2P53677 418 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 MYL7Q01449 175 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 SYCP1Q15431 976 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 KRT39Q6A163 491 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 SLC24A5Q71RS6 500 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 RTN4RL1Q86UN2 441 aaPredicted RBP21.14■□□□□ 0.98
SGCE-207ENST00000447873 VSTM4Q8IW00 320 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 SNX27Q96L92 541 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 PCMTD1Q96MG8 357 aaPredicted RBP21.14■□□□□ 0.98
SGCE-207ENST00000447873 ERGIC2Q96RQ1 377 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 CRACR2AQ9BSW2 395 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 TSPYL2Q9H2G4 693 aaPredicted RBP21.14■□□□□ 0.98
SGCE-207ENST00000447873 C1orf112Q9NSG2 853 aa21.14■□□□□ 0.98
SGCE-207ENST00000447873 A0A1W2PQC6 194 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 GTPBP10A4D1E9 387 aaKnown RBP21.14■□□□□ 0.97
SGCE-207ENST00000447873 P4HA2O15460 535 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 PBX1P40424 430 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 MFSD5Q6N075 450 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 GBP6Q6ZN66 633 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 MRPL10Q7Z7H8 261 aaKnown RBP21.14■□□□□ 0.97
SGCE-207ENST00000447873 TMEM199Q8N511 208 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 ZNF516Q92618 1163 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 PGBD4Q96DM1 585 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 HTATIP2Q9BUP3 242 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 KLK14Q9P0G3 267 aa21.14■□□□□ 0.97
SGCE-207ENST00000447873 PTPRJQ12913 1337 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 TFAMQ00059 246 aaKnown RBP21.13■□□□□ 0.97
SGCE-207ENST00000447873 DUOXA2Q1HG44 320 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 SPECC1LQ69YQ0 1117 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 SV2AQ7L0J3 742 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 TMC6Q7Z403 805 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 RNF169Q8NCN4 708 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 LINC01599Q8WXQ3 324 aa21.13■□□□□ 0.97
SGCE-207ENST00000447873 C9IYK1 514 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 PMM2O15305 246 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 NFICP08651 508 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 TMEM191BP0C7N4 346 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 BIRC3Q13489 604 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 TMEM132DQ14C87 1099 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 EXOC3L4Q17RC7 722 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 ALKAL1Q6UXT8 129 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 ECHDC2Q86YB7 292 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 NT5DC4Q86YG4 428 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 EFCAB13Q8IY85 973 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 C7orf61Q8IZ16 206 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 LPPQ93052 612 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 KIF12Q96FN5 646 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 ANKRD36BP1Q96IX9 119 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 FAM84AQ96KN4 292 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 GCNT4Q9P109 453 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 C2CD2Q9Y426 696 aa21.12■□□□□ 0.97
SGCE-207ENST00000447873 MEIS3P2A8K0S8 358 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms