RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 HES2Q9Y543 173 aa12.62□□□□□ -0.39
LINC00408-201ENST00000447784 KAT6AQ92794 2004 aa12.62□□□□□ -0.39
LINC00408-201ENST00000447784 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 SIP14410 1827 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ZNF233A6NK53 670 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 CETN3O15182 167 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 EXTL3O43909 919 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 AKAP5P24588 427 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ERCC5P28715 1186 aaPredicted RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ADSSP30520 456 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ACOT2P49753 483 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ADAM9Q13443 819 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 PTPROQ16827 1216 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 CEP135Q66GS9 1140 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 SMG8Q8ND04 991 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 URGCPQ8TCY9 931 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 RPS6KC1Q96S38 1066 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 PLVAPQ9BX97 442 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 RPF1Q9H9Y2 349 aaKnown RBP12.61□□□□□ -0.39
LINC00408-201ENST00000447784 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 SNTG2Q9NY99 539 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 GBF1Q92538 1859 aa12.61□□□□□ -0.39
LINC00408-201ENST00000447784 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 GOLGA8IPA6NC78 632 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 ABLIM1O14639 778 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 FGFR1P11362 822 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 NR2F2P24468 414 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 CTNNB1P35222 781 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 STX17P56962 302 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 GPM6BQ13491 265 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 SEZ6Q53EL9 994 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 CD302Q8IX05 232 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 CSGALNACT2Q8N6G5 542 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 LPPQ93052 612 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 C11orf84Q9BUA3 381 aaPredicted RBP12.6□□□□□ -0.39
LINC00408-201ENST00000447784 LMAN2LQ9H0V9 348 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 PLEKHA5Q9HAU0 1116 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 INPP5FQ9Y2H2 1132 aa12.6□□□□□ -0.39
LINC00408-201ENST00000447784 MRPL42Q9Y6G3 142 aaKnown RBP12.6□□□□□ -0.39
LINC00408-201ENST00000447784 MYH9P35579 1960 aaKnown RBP12.6□□□□□ -0.39
LINC00408-201ENST00000447784 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 RECQL4O94761 1208 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 KRT13P13646 458 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 MLH1P40692 756 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 POU5F1Q01860 360 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 NFIL3Q16649 462 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 USP37Q86T82 979 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 CEP120Q8N960 986 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 HELQQ8TDG4 1101 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 GAD1Q99259 594 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 MRPL9Q9BYD2 267 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 HAPLN2Q9GZV7 340 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 TMEM117Q9H0C3 514 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 RBAKQ9NYW8 714 aaPredicted RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 CPSF3Q9UKF6 684 aaKnown RBP12.59□□□□□ -0.39
LINC00408-201ENST00000447784 COG5Q9UP83 839 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
LINC00408-201ENST00000447784 TRIM49BA6NDI0 452 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 ARL5CA6NH57 179 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 OFD1O75665 1012 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 IL18RAPO95256 599 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 CAVIN2O95810 425 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 CXCL8P10145 99 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
LINC00408-201ENST00000447784 ATF7P17544 494 aaPredicted RBP12.58□□□□□ -0.4
LINC00408-201ENST00000447784 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
LINC00408-201ENST00000447784 TNFSF9P41273 254 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 SURF1Q15526 300 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
LINC00408-201ENST00000447784 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 NOMO2Q5JPE7 1267 aa12.58□□□□□ -0.4
LINC00408-201ENST00000447784 ZBTB41Q5SVQ8 909 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms