RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ATF7P17544 494 aaPredicted RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 OTOP1Q7RTM1 612 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 CROCCP2Q86T23 111 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 KDM4CQ9H3R0 1056 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 SNX24Q9Y343 169 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 BZW2Q9Y6E2 419 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 SRRM3A6NNA2 597 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 SLITRK3O94933 977 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ITGB5P18084 799 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PHKA2P46019 1235 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 DR1Q01658 176 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 KCNA1Q09470 495 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ALCAMQ13740 583 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 C10orf76Q5T2E6 689 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 KAZNQ674X7 775 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CAPRIN2Q6IMN6 1127 aaKnown RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 TMEM270Q6UE05 265 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 POLR3CQ9BUI4 534 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 L3MBTL1Q9Y468 752 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PLS3P13797 630 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CALCOCO2Q13137 446 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 BIRC2Q13490 618 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 GNASQ5JWF2 1037 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 RSPH3Q86UC2 560 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 COPS5Q92905 334 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 TATDN2Q93075 761 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 GPRASP2Q96D09 838 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PRMT1Q99873 361 aaKnown RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PI4K2AQ9BTU6 479 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 HESX1Q9UBX0 185 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CFAP73A6NFT4 308 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ANP32DO95626 131 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ELF3P78545 371 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 TRPM8Q7Z2W7 1104 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 MTMR9Q96QG7 549 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 FAM167BQ9BTA0 163 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 GLI3P10071 1580 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PRKCBP05771 671 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 SNHG28P0DPA3 235 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
PTCH2-203ENST00000447098 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 CCDC105Q8IYK2 499 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 BAP1Q92560 729 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 BATF3Q9NR55 127 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 ASIC3Q9UHC3 531 aa12.03□□□□□ -0.48
PTCH2-203ENST00000447098 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 CAND2O75155 1236 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.48
PTCH2-203ENST00000447098 GH1P01241 217 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 PMS2P54278 862 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 CATSPERGQ6ZRH7 1159 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 VSIG1Q86XK7 387 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 RAET1EQ8TD07 263 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 SCFD1Q8WVM8 642 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 PIK3R5Q8WYR1 880 aa12.02□□□□□ -0.48
PTCH2-203ENST00000447098 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.48
PTCH2-203ENST00000447098 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.48
PTCH2-203ENST00000447098 INTS2Q9H0H0 1204 aaKnown RBP12.02□□□□□ -0.48
PTCH2-203ENST00000447098 ENO4A6NNW6 628 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 TBC1D12O60347 775 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 ZNF286BP0CG31 522 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 CIITAP33076 1130 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 TAF11Q15544 211 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 Q4G0T1 1027 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 LRRC34Q8IZ02 419 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 SMARCAD1Q9H4L7 1026 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 ECT2Q9H8V3 914 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 BTAF1O14981 1849 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 TISP43B9A030 160 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 CXCL11O14625 94 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 OATP04181 439 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 GBP1P32455 592 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 RNASELQ05823 741 aaKnown RBP12.02□□□□□ -0.49
PTCH2-203ENST00000447098 PPATQ06203 517 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 SETDB1Q15047 1291 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 PPP2R5EQ16537 467 aa12.02□□□□□ -0.49
PTCH2-203ENST00000447098 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms