RNA–Protein interactions for RNA: ENST00000446054.1

HMGN2P11-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 11, humanhuman

BASIC

Gene HMGN2P11, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P11-201ENST00000446054 GRM5P41594 1212 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 FAM171A1Q5VUB5 890 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 FAM173BQ6P4H8 233 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 LILRA6Q6PI73 481 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 ALKAL1Q6UXT8 129 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 KCTD17Q8N5Z5 321 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 AK8Q96MA6 479 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 TCHPQ9BT92 498 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 TIPINQ9BVW5 301 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 SMOC2Q9H3U7 446 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 FNIP2Q9P278 1114 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 LIMD1Q9UGP4 676 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 CLIC4Q9Y696 253 aa12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 SF3B1O75533 1304 aaKnown RBP eCLIP12.04□□□□□ -0.48
HMGN2P11-201ENST00000446054 SMIM28A0A1B0GU29 152 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 MEFVO15553 781 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 ASGR2P07307 311 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 SYT1P21579 422 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CLCNKBP51801 687 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 SMTNP53814 917 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 MCM6Q14566 821 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 KARSQ15046 597 aaKnown RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 MPZL3Q6UWV2 235 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CD300LGQ6UXG3 332 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 APBB1IPQ7Z5R6 666 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 TDRD5Q8NAT2 981 aaKnown RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 KREMEN2Q8NCW0 462 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 LNX1Q8TBB1 728 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 FAM122AQ96E09 287 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 ASIC4Q96FT7 647 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CLSTN3Q9BQT9 956 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 TTPALQ9BTX7 342 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 CITO14578 2027 aa12.03□□□□□ -0.48
HMGN2P11-201ENST00000446054 ADAM12O43184 909 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 B3GAT3O94766 335 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 BRD1O95696 1058 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 BMP15O95972 392 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 MAPTP10636 758 aaKnown RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 MCF2P10911 925 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 PLCG1P19174 1290 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 PDCP20941 246 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 MARCKSP29966 332 aaPredicted RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 SIGLEC14Q08ET2 396 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 STRN3Q13033 797 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 RESTQ13127 1097 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 PTPAQ15257 358 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 PSMD5Q16401 504 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 UPP1Q16831 310 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 XKR4Q5GH76 650 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 DCLRE1AQ6PJP8 1040 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 CCDC149Q6ZUS6 474 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 BMP8AQ7Z5Y6 402 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 GPBP1Q86WP2 473 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 GPR65Q8IYL9 337 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 ZDHHC14Q8IZN3 488 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 C3orf58Q8NDZ4 430 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 CMASQ8NFW8 434 aaPredicted RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 PIK3R5Q8WYR1 880 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 ZNF707Q96C28 371 aaPredicted RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 EPSTI1Q96J88 318 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 MFSD14AQ96MC6 490 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 REEP2Q9BRK0 252 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 KCND2Q9NZV8 630 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 ANKFY1Q9P2R3 1169 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 DPP7Q9UHL4 492 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 USTQ9Y2C2 406 aa12.02□□□□□ -0.49
HMGN2P11-201ENST00000446054 TMEM189-UBE2V1I3L0A0 370 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 I3L4J1 428 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 SLC26A4O43511 780 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 TOM1L1O75674 476 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 BRCC3P46736 316 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 CREMQ03060 361 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 CEBPZQ03701 1054 aaKnown RBP12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
HMGN2P11-201ENST00000446054 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms