RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 UROC1Q96N76 676 aa20.63■□□□□ 0.89
ATPAF2-201ENST00000444058 ACAP3Q96P50 834 aa20.63■□□□□ 0.89
ATPAF2-201ENST00000444058 PAAF1Q9BRP4 392 aa20.63■□□□□ 0.89
ATPAF2-201ENST00000444058 CXCL16Q9H2A7 254 aa20.63■□□□□ 0.89
ATPAF2-201ENST00000444058 SLC38A7Q9NVC3 462 aa20.63■□□□□ 0.89
ATPAF2-201ENST00000444058 SMIM28A0A1B0GU29 152 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 CASTOR2A6NHX0 329 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 TMEM189-UBE2V1I3L0A0 370 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 TEX28O15482 410 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 TRAK2O60296 914 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 KRT18P05783 430 aaKnown RBP20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 DHX8Q14562 1220 aaKnown RBP20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 SPECC1Q5M775 1068 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 MYCT1Q8N699 235 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 CEP120Q8N960 986 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 FBXL18Q96ME1 805 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 CLIC6Q96NY7 704 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 FNIP2Q9P278 1114 aa20.62■□□□□ 0.89
ATPAF2-201ENST00000444058 C2CD2LO14523 706 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 CLDN3O15551 220 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 DCXO43602 365 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 GPR37L1O60883 481 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 TBCAO75347 108 aaKnown RBP20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 PIGRP01833 764 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 KCNE1P15382 129 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 MTHFRP42898 656 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 MCL1Q07820 350 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 NOLC1Q14978 699 aaKnown RBP eCLIP20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 RRAGBQ5VZM2 374 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 ELMSAN1Q6PJG2 1045 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 DCLRE1AQ6PJP8 1040 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 CCDC73Q6ZRK6 1079 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 LINC00301Q8NCQ3 95 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 HDAC7Q8WUI4 952 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 RIPOR3Q96MK2 946 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 SFXN1Q9H9B4 322 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 TBX20Q9UMR3 447 aa20.61■□□□□ 0.89
ATPAF2-201ENST00000444058 MYH11P35749 1972 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 PPP6R2O75170 966 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 KIF4AO95239 1232 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 KYAT1Q16773 422 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 ATAT1Q5SQI0 421 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 PDXDC1Q6P996 788 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 RNF135Q8IUD6 432 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 RABGGTAQ92696 567 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 DDX27Q96GQ7 796 aaKnown RBP20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 SNX27Q96L92 541 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 RHOBTB2Q9BYZ6 727 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 ST6GALNAC4Q9H4F1 302 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 CNTN3Q9P232 1028 aa20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.6■□□□□ 0.89
ATPAF2-201ENST00000444058 GLUD1P00367 558 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 OSTNP61366 133 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 GTF2BQ00403 316 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 STK38Q15208 465 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 UPP1Q16831 310 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 GLRA4Q5JXX5 417 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 TMEM31Q5JXX7 168 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 C15orf39Q6ZRI6 1047 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 SV2BQ7L1I2 683 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 CMASQ8NFW8 434 aaPredicted RBP20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 RIN2Q8WYP3 895 aaPredicted RBP20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 PIK3R5Q8WYR1 880 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 ZBTB45Q96K62 511 aaPredicted RBP20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 RPGRIP1Q96KN7 1286 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 FIZ1Q96SL8 496 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 TTPALQ9BTX7 342 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 APOL5Q9BWW9 433 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 PLEKHA5Q9HAU0 1116 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 ANKFY1Q9P2R3 1169 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 CACNG4Q9UBN1 327 aa20.59■□□□□ 0.89
ATPAF2-201ENST00000444058 C5orf42Q9H799 3197 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 K7ENM7 598 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 HNRNPDLO14979 420 aaKnown RBP20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 SPTLC2O15270 562 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 TRAPPC3O43617 180 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 B3GAT3O94766 335 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 PAPLNO95428 1278 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 YEATS4O95619 227 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 LIG4P49917 911 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 RTP2Q5QGT7 225 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 RARS2Q5T160 578 aaKnown RBP20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 FAM171A1Q5VUB5 890 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 CYP26C1Q6V0L0 522 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 GPR149Q86SP6 731 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 BICD1Q96G01 975 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 B3GALT6Q96L58 329 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 PLEKHA4Q9H4M7 779 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 NR2E1Q9Y466 385 aa20.58■□□□□ 0.89
ATPAF2-201ENST00000444058 CLTAP09496 248 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 RPL9P32969 192 aaKnown RBP20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 CLCNKBP51801 687 aa20.57■□□□□ 0.88
ATPAF2-201ENST00000444058 SLC10A6Q3KNW5 377 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms