RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 DMP1Q13316 513 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 PSMD5Q16401 504 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 NT5DC1Q5TFE4 455 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 LIN9Q5TKA1 542 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 EEF1DP3Q658K8 133 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 ATOH1Q92858 354 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 DDX27Q96GQ7 796 aaKnown RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 PPP1R10Q96QC0 940 aaKnown RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 PAAF1Q9BRP4 392 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 CCDC94Q9BW85 323 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 MRPL4Q9BYD3 311 aaKnown RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 SLC38A7Q9NVC3 462 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 ARHGAP28Q9P2N2 729 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 MYO10Q9HD67 2058 aa17.94■□□□□ 0.46
CTDSP1-204ENST00000443891 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 LIG1P18858 919 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 AOC1P19801 751 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 GRM5P41594 1212 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 NPTX2P47972 431 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 C8orf34Q49A92 452 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 XKR4Q5GH76 650 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 HYIQ5T013 277 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 TMEM105Q8N8V8 129 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 B3GALT6Q96L58 329 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 ACO2Q99798 780 aaKnown RBP17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 CLSTN3Q9BQT9 956 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 NTPCRQ9BSD7 190 aaKnown RBP17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 KCND2Q9NZV8 630 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 FBXL21Q9UKT6 434 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 GDAQ9Y2T3 454 aa17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.93■□□□□ 0.46
CTDSP1-204ENST00000443891 CCDC169A6NNP5 214 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 SLC26A4O43511 780 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 XYLBO75191 536 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 SPATA31D3P0C874 917 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 LAMP2P13473 410 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 FGFR3P22607 806 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 GUCY2CP25092 1073 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 MCM2P49736 904 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 PEX3P56589 373 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 RAB33AQ14088 237 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 NBR1Q14596 966 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 ARL6IP4Q66PJ3 421 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 SPATA31D4Q6ZUB0 917 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 ANKS3Q6ZW76 656 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 FEZF2Q8TBJ5 459 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 KIFC3Q9BVG8 833 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 SMOC2Q9H3U7 446 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 PTPRHQ9HD43 1115 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 KMT5AQ9NQR1 393 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 BACE2Q9Y5Z0 518 aa17.92■□□□□ 0.46
CTDSP1-204ENST00000443891 CACNA1HO95180 2353 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 ANHXE9PGG2 379 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 HIP1RO75146 1068 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 B3GAT3O94766 335 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 EDN1P05305 212 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 MCF2P10911 925 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 SRFP11831 508 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 RPL17P18621 184 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 SCP2P22307 547 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 UPP1Q16831 310 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 PPM1LQ5SGD2 360 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 RINT1Q6NUQ1 792 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 ALKAL1Q6UXT8 129 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 DAW1Q8N136 415 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 SLC44A3Q8N4M1 653 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 HASPINQ8TF76 798 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 SPIRE2Q8WWL2 714 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 RABGGTAQ92696 567 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 MYADMQ96S97 322 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 MTRRQ9UBK8 725 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 WDFY4Q6ZS81 3184 aa17.91■□□□□ 0.46
CTDSP1-204ENST00000443891 MTCL1Q9Y4B5 1905 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 SMIM28A0A1B0GU29 152 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 E9PMD0 336 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 H0YCG3 227 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 C8AP07357 584 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 PROZP22891 400 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 FSHRP23945 695 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 SMTNP53814 917 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 ZNF568Q3ZCX4 644 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 CWF19L1Q69YN2 538 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 GLYCTKQ8IVS8 523 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 KCNN1Q92952 543 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 CDT1Q9H211 546 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 PLXNA3P51805 1871 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 C2orf16Q68DN1 1984 aa17.9■□□□□ 0.46
CTDSP1-204ENST00000443891 H0Y858 1186 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 KCNE1P15382 129 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 NPR3P17342 541 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 RPL9P32969 192 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 NBL1P41271 181 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 CLCNKBP51801 687 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 STRN3Q13033 797 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms