RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SYTL3Q4VX76 610 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 MB21D2Q8IYB1 491 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 RDM1Q8NG50 284 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 BPIFA3Q9BQP9 254 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 L3MBTL1Q9Y468 752 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 THPOP40225 353 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 IFNAR2P48551 515 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 SPARCL1Q14515 664 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 RABL6Q3YEC7 729 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 ATF7IP2Q5U623 682 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 KSR1Q8IVT5 923 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 TMEM143Q96AN5 459 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 HOXC6P09630 235 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 WDR75Q8IWA0 830 aaKnown RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 TDP2O95551 362 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 OTUB1Q96FW1 271 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 RTN2O75298 545 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 OCM2P0CE71 109 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 OCMP0CE72 109 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 CDH6P55285 790 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 NCOA4Q13772 614 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 PLEKHH3Q7Z736 793 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 SIRT2Q8IXJ6 389 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 MTBPQ96DY7 904 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 SPATA17Q96L03 361 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 ABHD10Q9NUJ1 306 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 PCSK1NQ9UHG2 260 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 LTN1O94822 1766 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 MAPK13O15264 365 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 ACSL3O95573 720 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 HABP4Q5JVS0 413 aaKnown RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 BFARQ9NZS9 450 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 SESN3P58005 492 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 PRKCEQ02156 737 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 USP13Q92995 863 aaPredicted RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 C11orf70Q9BRQ4 267 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 SLC1A1P43005 524 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 EMC2Q15006 297 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 WDR72Q3MJ13 1102 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 IL31Q6EBC2 164 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 ATPAF2Q8N5M1 289 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 TEKT4Q8WW24 435 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 NT5C1AQ9BXI3 368 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 ASPSCR1Q9BZE9 553 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 INTS2Q9H0H0 1204 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 SLC8A1P32418 973 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 AMPD2Q01433 879 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 GPS1Q13098 491 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 MRPL46Q9H2W6 279 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 MXRA8Q9BRK3 442 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 YIPF2Q9BWQ6 316 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 NFU1Q9UMS0 254 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 PIK3R2O00459 728 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 KCTD16Q68DU8 428 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 GTSE1Q9NYZ3 720 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 MICAL3Q7RTP6 2002 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 PDXKO00764 312 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 MFAP3LO75121 409 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 CLTAP09496 248 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 ESRRGP62508 458 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 KCNA1Q09470 495 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 NCLNQ969V3 563 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 OLFML3Q9NRN5 406 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 CPSF2Q9P2I0 782 aaKnown RBP11.86□□□□□ -0.51
FN1-211ENST00000443816 PCDHGB4Q9UN71 923 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 SNX9Q9Y5X1 595 aa11.86□□□□□ -0.51
FN1-211ENST00000443816 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 KCNB1Q14721 858 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 TMCO4Q5TGY1 634 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 HSPBP1Q9NZL4 362 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
FN1-211ENST00000443816 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 LUC7L3O95232 432 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms