RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 MLF2Q15773 248 aaPredicted RBP13.17□□□□□ -0.3
TNXB-202ENST00000442721 PSMD5Q16401 504 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 CALCRLQ16602 461 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 FAM171A1Q5VUB5 890 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 MTSS1LQ765P7 747 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 HASPINQ8TF76 798 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 FGF13Q92913 245 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 OSBPL6Q9BZF3 934 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
TNXB-202ENST00000442721 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
TNXB-202ENST00000442721 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 WNT7AO00755 349 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 N4BP3O15049 544 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 CCL16O15467 120 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 XYLBO75191 536 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 KRT2P35908 639 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 PUM1Q14671 1186 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNXB-202ENST00000442721 PDXDC1Q6P996 788 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 DGLUCYQ7Z3D6 616 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 DLL3Q9NYJ7 618 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
TNXB-202ENST00000442721 FBXO4Q9UKT5 387 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
TNXB-202ENST00000442721 A0A087WWV3 80 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 NEMFO60524 1076 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 RECQL4O94761 1208 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 THP07101 528 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 RAB33AQ14088 237 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 RSPO2Q6UXX9 243 aaPredicted RBP13.15□□□□□ -0.3
TNXB-202ENST00000442721 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
TNXB-202ENST00000442721 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 WASF1Q92558 559 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 BCO2Q9BYV7 579 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 KCNH3Q9ULD8 1083 aa13.15□□□□□ -0.3
TNXB-202ENST00000442721 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
TNXB-202ENST00000442721 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 SPTLC1O15269 473 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
TNXB-202ENST00000442721 EDN1P05305 212 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 FGFR3P22607 806 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 TXKP42681 527 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 MAGEA9P43362 315 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
TNXB-202ENST00000442721 PFKPQ01813 784 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 RTL10Q7L3V2 364 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 MAEAQ7L5Y9 396 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 BSNDQ8WZ55 320 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 NELL1Q92832 810 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 CLDN23Q96B33 292 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 TUFT1Q9NNX1 390 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
TNXB-202ENST00000442721 PCDHGA2Q9Y5H1 932 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 TRIP11Q15643 1979 aa13.14□□□□□ -0.31
TNXB-202ENST00000442721 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 ACKR2O00590 384 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 ECI2O75521 394 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
TNXB-202ENST00000442721 OR1D2P34982 312 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
TNXB-202ENST00000442721 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 MAPK6Q16659 721 aa13.13□□□□□ -0.31
TNXB-202ENST00000442721 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms