RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 THEM5Q8N1Q8 247 aa16.51■□□□□ 0.23
CDH23-207ENST00000442677 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
CDH23-207ENST00000442677 NOD2Q9HC29 1040 aa16.51■□□□□ 0.23
CDH23-207ENST00000442677 LDHAP00338 332 aaKnown RBP16.51■□□□□ 0.23
CDH23-207ENST00000442677 SDC4P31431 198 aa16.51■□□□□ 0.23
CDH23-207ENST00000442677 FAM102AQ5T9C2 384 aaPredicted RBP16.51■□□□□ 0.23
CDH23-207ENST00000442677 ARHGEF3Q9NR81 526 aa16.51■□□□□ 0.23
CDH23-207ENST00000442677 SMARCAL1Q9NZC9 954 aa16.51■□□□□ 0.23
CDH23-207ENST00000442677 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
CDH23-207ENST00000442677 RASSF9O75901 435 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 RCN1Q15293 331 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ARL6IP4Q66PJ3 421 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 BFARQ9NZS9 450 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 TRIM10Q9UDY6 481 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 LIMA1Q9UHB6 759 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ZNF513Q8N8E2 541 aaPredicted RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 LCP1P13796 627 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ADORA2BP29275 332 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 CDC27P30260 824 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 PPP3CCP48454 512 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 CDKL3Q8IVW4 592 aaPredicted RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 OR8H2Q8N162 312 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 RMDN1Q96DB5 314 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ZBED2Q9BTP6 218 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 SYBUQ9NX95 663 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 UTP6Q9NYH9 597 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 GGPS1O95749 300 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 VHLP40337 213 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 SEC24CP53992 1094 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 BYSLQ13895 437 aaKnown RBP16.5■□□□□ 0.23
CDH23-207ENST00000442677 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 GPR141Q7Z602 305 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 PROM2Q8N271 834 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 TTC23LQ6PF05 361 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 RAD54LQ92698 747 aa16.5■□□□□ 0.23
CDH23-207ENST00000442677 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 TMEM191CA6NGB0 347 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 SMNDC1O75940 238 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDH23-207ENST00000442677 APRTP07741 180 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 KIRREL3Q8IZU9 778 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 CMTM5Q96DZ9 223 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 XPO6Q96QU8 1125 aaKnown RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 USP1O94782 785 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 SLC16A1P53985 500 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 ZCWPW2Q504Y3 356 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 NMD3Q96D46 503 aaKnown RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 CCT8L1PA6NM43 557 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 ALBP02768 609 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 MIGA2Q7L4E1 593 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 TASP1Q9H6P5 420 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 BCS1LQ9Y276 419 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 PRG3Q9Y2Y8 225 aaPredicted RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 GPATCH8Q9UKJ3 1502 aaKnown RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 ZNF568Q3ZCX4 644 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 FUT11Q495W5 492 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 P3H2Q8IVL5 708 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 CEP95Q96GE4 821 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 KRT34O76011 436 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 SLC7A5P2Q9GIP4 190 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 DONSONQ9NYP3 566 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 PYGMP11217 842 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 PLA2G4AP47712 749 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 MTM1Q13496 603 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 NLRP9Q7RTR0 991 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 HES6Q96HZ4 224 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 SHCBP1LQ9BZQ2 653 aa16.49■□□□□ 0.23
CDH23-207ENST00000442677 GPBP1L1Q9HC44 474 aaPredicted RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 SMG5Q9UPR3 1016 aaKnown RBP16.49■□□□□ 0.23
CDH23-207ENST00000442677 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
CDH23-207ENST00000442677 MYL2P10916 166 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 WLSQ5T9L3 541 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 ITPRIPL1Q6GPH6 555 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 SPON2Q9BUD6 331 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 MAGEA13PA6NCF6 341 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 KLHL18O94889 574 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 TPP2P29144 1249 aaPredicted RBP16.48■□□□□ 0.23
CDH23-207ENST00000442677 CENPPQ6IPU0 288 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 AP3B1O00203 1094 aa16.48■□□□□ 0.23
CDH23-207ENST00000442677 NFX1Q12986 1120 aaKnown RBP16.48■□□□□ 0.23
CDH23-207ENST00000442677 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms