RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 KCNE1P15382 129 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 NDUFV1P49821 464 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 ELAVL2Q12926 359 aaKnown RBP13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 COASYQ13057 564 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 KCNC3Q14003 757 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 HSP90AA2PQ14568 343 aaPredicted RBP13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 STXBP4Q6ZWJ1 553 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 SNX27Q96L92 541 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 STRA6Q9BX79 667 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 IGFLR1Q9H665 355 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 MARCH5Q9NX47 278 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.21
CDCA4P3-201ENST00000442572 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 SMIM28A0A1B0GU29 152 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 OGTO15294 1046 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 TADA2AO75478 443 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 URODP06132 367 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 IDEP14735 1019 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CMA1P23946 247 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 NMT1P30419 496 aaKnown RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CREMQ03060 361 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 POSTNQ15063 836 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 FUT10Q6P4F1 479 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 RBM23Q86U06 439 aaKnown RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CD302Q8IX05 232 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CEP120Q8N960 986 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CASP10Q92851 521 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 DHX58Q96C10 678 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 EMILIN2Q9BXX0 1053 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 MRPL17Q9NRX2 175 aaKnown RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 CD207Q9UJ71 328 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 KCNH3Q9ULD8 1083 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 PRG3Q9Y2Y8 225 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 STYXL1Q9Y6J8 313 aa13.7□□□□□ -0.22
CDCA4P3-201ENST00000442572 A0A0B4J269 797 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 LILRB3O75022 631 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 TBX10O75333 385 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 CSPG5O95196 566 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 GLP2RO95838 553 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 MYL1P05976 194 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 ADRB2P07550 413 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 RPL9P32969 192 aaKnown RBP13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 KCNQ1P51787 676 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 DSG1Q02413 1049 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 PTPN14Q15678 1187 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 PDXDC1Q6P996 788 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 DCLRE1AQ6PJP8 1040 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 CEP57L1Q8IYX8 460 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 ADAMTS19Q8TE59 1207 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 TMEM206Q9H813 350 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 DZANK1Q9NVP4 752 aa13.69□□□□□ -0.22
CDCA4P3-201ENST00000442572 FAM237AA0A1B0GTK4 181 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 TTC26A0AVF1 554 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 H3BQ06 376 aaPredicted RBP13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 DLL1O00548 723 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 PER2O15055 1255 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 EIF3DO15371 548 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 LINC01565O15544 149 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
CDCA4P3-201ENST00000442572 FAM189A1O60320 539 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms