RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TUBA4AP68366 448 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 ZNF200P98182 395 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 LRRC24Q50LG9 513 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 MCUQ8NE86 351 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SLC35G2Q8TBE7 412 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SYN2Q92777 582 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 MCRS1Q96EZ8 462 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 TLR10Q9BXR5 811 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 TAGLN3Q9UI15 199 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 PLEKHG1Q9ULL1 1385 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 DNALI1O14645 258 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 TBC1D12O60347 775 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 KCNJ1P48048 391 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 CLK1P49759 484 aaKnown RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 RAB14P61106 215 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 ITGADQ13349 1161 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 MICU2Q8IYU8 434 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SEPT8Q92599 483 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 UBXN6Q9BZV1 441 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 ADAM22Q9P0K1 906 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 CNOT3O75175 753 aaKnown RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 KRT36O76013 467 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 HOXC9P31274 260 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 MXI1P50539 228 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 AMPD2Q01433 879 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 PLOD1Q02809 727 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 DRAP1Q14919 205 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 SPDYCQ5MJ68 293 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 C1orf131Q8NDD1 294 aaKnown RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SDR42E1Q8WUS8 393 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 SKA1Q96BD8 255 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 LRMDAQ9H2I8 198 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 TRPC7Q9HCX4 862 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
LIN54-202ENST00000442461 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
LIN54-202ENST00000442461 GOLGA8CPA6NN73 597 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 K7ENM7 598 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 WDR47O94967 919 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 MYL2P10916 166 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 CCDC130P13994 396 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ADD2P35612 726 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 KLK7P49862 253 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 MTFR1Q15390 333 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 SETD3Q86TU7 594 aaPredicted RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 FBXL13Q8NEE6 735 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 E2F7Q96AV8 911 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 CALN1Q9BXU9 219 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 NEU2Q9Y3R4 380 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ARHGDIAP52565 204 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 RPS6P62753 249 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 SLC45A4Q5BKX6 768 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 VPS11Q9H270 941 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 WBP4O75554 376 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 PLA2G4BP0C869 781 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 FCER1AP12319 257 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ARSEP51690 589 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ITGA8P53708 1063 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ATXN3P54252 364 aaPredicted RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 GABPAQ06546 454 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 PDK3Q15120 406 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 KLHDC7AQ5VTJ3 777 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 DNAJC24Q6P3W2 148 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 SUN5Q8TC36 379 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 FAF2Q96CS3 445 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 KLF6Q99612 283 aaPredicted RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 CDC42EP4Q9H3Q1 356 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 AFF2P51816 1311 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 AP3B1O00203 1094 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 LDHBP07195 334 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 KRT7P08729 469 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 PTPN12Q05209 780 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 MEI1Q5TIA1 1274 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 CKAP2Q8WWK9 683 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 DEPDC7Q96QD5 511 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 KIAA1683Q9H0B3 1180 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 KLC2Q9H0B6 622 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 RNPEPQ9H4A4 650 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 C20orf96Q9NUD7 363 aaPredicted RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 ARHGEF38Q9NXL2 777 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 STMN3Q9NZ72 180 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 MYRFQ9Y2G1 1151 aa10.87□□□□□ -0.67
LIN54-202ENST00000442461 RTCBQ9Y3I0 505 aaKnown RBP10.87□□□□□ -0.67
LIN54-202ENST00000442461 CCDC189A1A4V9 331 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 ZBED4O75132 1171 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms