RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 FOXN3O00409 490 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 MSCO60682 206 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 TADA3O75528 432 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 CYP2C9P11712 490 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 AXLP30530 894 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 TM4SF4P48230 202 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 CLDN10P78369 228 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 APBA1Q02410 837 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 C1orf220Q5T0J3 134 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 LIN9Q5TKA1 542 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PHLDB3Q6NSJ2 640 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 DPY19L2P1Q6NXN4 242 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 ARHGEF19Q8IW93 802 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 FAM71AQ8IYT1 594 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GPR161Q8N6U8 529 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 LMO3Q8TAP4 145 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 RFFLQ8WZ73 363 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 IRX2Q9BZI1 471 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 RNPEPQ9H4A4 650 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PASKQ96RG2 1323 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 CNTNAP2Q9UHC6 1331 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 SMIM35A0A1B0GVV1 85 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 ZNF263O14978 683 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 XPOTO43592 962 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 RTN2O75298 545 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GZMAP12544 262 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 YARSP54577 528 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 MBTD1Q05BQ5 628 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 NCOA4Q13772 614 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 RPS6KA1Q15418 735 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 SGSM1Q2NKQ1 1148 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GJC2Q5T442 439 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 CATSPER4Q7RTX7 472 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 TRAPPC11Q7Z392 1133 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 THNSL1Q8IYQ7 743 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PLEKHO2Q8TD55 490 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 FAXDC2Q96IV6 333 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 C16orf70Q9BSU1 422 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 ASB7Q9H672 318 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 TOPORSQ9NS56 1045 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 TRIM10Q9UDY6 481 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PCDHB4Q9Y5E5 795 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 ZNFX1Q9P2E3 1918 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 NCANO14594 1321 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 A0A087WZ62 844 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 ZBTB42B2RXF5 422 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 DDX3XO00571 662 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS50-205ENST00000441602 C4BPAP04003 597 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 TFAMQ00059 246 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 CRHR2Q13324 411 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 NFRKBQ6P4R8 1299 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 GLYCTKQ8IVS8 523 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 HACE1Q8IYU2 909 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 RPUSD2Q8IZ73 545 aaKnown RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 NME8Q8N427 588 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 MSANTD4Q8NCY6 345 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 USP6NLQ92738 828 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PBKQ96KB5 322 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 FDXACB1Q9BRP7 624 aaPredicted RBP6.48□□□□□ -1.37
VPS50-205ENST00000441602 CDT1Q9H211 546 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 LCMT1Q9UIC8 334 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 AMFRQ9UKV5 643 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 SNX12Q9UMY4 172 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 CEP83Q9Y592 693 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 PCDHB2Q9Y5E7 798 aa6.48□□□□□ -1.37
VPS50-205ENST00000441602 DOCK5Q9H7D0 1870 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 C17orf102A2RUQ5 167 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 BUB1O43683 1085 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 B4GALT4O60513 344 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 DUSP11O75319 330 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 F2P00734 622 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 SMIM10L2AP0DMW4 78 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 SMIM10L2BP0DMW5 78 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 MYBL1P10243 752 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 NOP14P78316 857 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 GPC5P78333 572 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 CDR2Q01850 454 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 DRP2Q13474 957 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 CUL2Q13617 745 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 CFAP221Q4G0U5 840 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 C15orf39Q6ZRI6 1047 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 PEX26Q7Z412 305 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 C7orf31Q8N865 590 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 HELQQ8TDG4 1101 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 MTG1Q9BT17 334 aaPredicted RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 NIF3L1Q9GZT8 377 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 FAM49AQ9H0Q0 323 aaPredicted RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 CTTNBP2NLQ9P2B4 639 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 PUF60Q9UHX1 559 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 CPSF3Q9UKF6 684 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 PLXNA1Q9UIW2 1896 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 RCCD1A6NED2 376 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms