RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TRIM59Q8IWR1 403 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 INPP5DQ92835 1189 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 PNMA5Q96PV4 448 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 FGFBP2Q9BYJ0 223 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 CDC42EP4Q9H3Q1 356 aaKnown RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 NDUFB10O96000 172 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 SPATA31D3P0C874 917 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 ECE1P42892 770 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 ECM1Q16610 540 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 DSTYKQ6XUX3 929 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 SPATA31D4Q6ZUB0 917 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 LARGE2Q8N3Y3 721 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 MAGEB18Q96M61 343 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 SUDS3Q9H7L9 328 aaPredicted RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 ZNF232Q9UNY5 417 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 CAPN9O14815 690 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 UCHL3P15374 230 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 HOXA13P31271 388 aaPredicted RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 PTGIRP43119 386 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
PMS1-213ENST00000441310 SLC35G2Q8TBE7 412 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 A0A1W2PRG0 241 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 MAPK13O15264 365 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 CYP1A1P04798 512 aaPredicted RBP17.9■□□□□ 0.46
PMS1-213ENST00000441310 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
PMS1-213ENST00000441310 STAT3P40763 770 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 MAGEA10P43363 369 aaPredicted RBP17.9■□□□□ 0.46
PMS1-213ENST00000441310 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 ALG3Q92685 438 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 HAS1Q92839 578 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 NPHP3-ACAD11A0A0J9YXS1 232 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 DDX3XO00571 662 aaKnown RBP eCLIP17.9■□□□□ 0.467e-11■■■□□ 18.9
PMS1-213ENST00000441310 MARK3P27448 753 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 CCNFP41002 786 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 USP46P62068 366 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 DEUP1Q05D60 604 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 KRT79Q5XKE5 535 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 TTC27Q6P3X3 843 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 LRRC74BQ6ZQY2 392 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 LCA5Q86VQ0 697 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 CYP4X1Q8N118 509 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 P2RX7Q99572 595 aaKnown RBP17.9■□□□□ 0.46
PMS1-213ENST00000441310 SLCO1B3Q9NPD5 702 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
PMS1-213ENST00000441310 TMEM62Q0P6H9 643 aa17.89■□□□□ 0.46
PMS1-213ENST00000441310 GJB7Q6PEY0 223 aa17.89■□□□□ 0.46
PMS1-213ENST00000441310 VPS36Q86VN1 386 aa17.89■□□□□ 0.46
PMS1-213ENST00000441310 ROPN1BQ9BZX4 212 aaPredicted RBP17.89■□□□□ 0.46
PMS1-213ENST00000441310 ROPN1Q9HAT0 212 aaPredicted RBP17.89■□□□□ 0.46
PMS1-213ENST00000441310 TTC7AQ9ULT0 858 aaPredicted RBP17.89■□□□□ 0.46
PMS1-213ENST00000441310 PFDN1O60925 122 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 GNA14O95837 355 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 LMNAP02545 664 aaKnown RBP17.89■□□□□ 0.45
PMS1-213ENST00000441310 KCNJ1P48048 391 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 DRG2P55039 364 aaKnown RBP17.89■□□□□ 0.45
PMS1-213ENST00000441310 LLGL1Q15334 1064 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PPP2R5EQ16537 467 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 RBM26Q5T8P6 1007 aaKnown RBP17.89■□□□□ 0.45
PMS1-213ENST00000441310 ARHGEF18Q6ZSZ5 1173 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 ACER1Q8TDN7 264 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 GATA6Q92908 595 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 FAM192AQ9GZU8 254 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PDP2Q9P2J9 529 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PPP1R1BQ9UD71 204 aaPredicted RBP17.89■□□□□ 0.45
PMS1-213ENST00000441310 PCDHA12Q9UN75 941 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 IGSF9BQ9UPX0 1349 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PDLIM1O00151 329 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 FAM200BP0CF97 657 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 ZCWPW2Q504Y3 356 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PPFIBP2Q8ND30 876 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 DYDC2Q96IM9 177 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 RUNDC3BQ96NL0 473 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 BZW2Q9Y6E2 419 aaKnown RBP17.89■□□□□ 0.45
PMS1-213ENST00000441310 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.45
PMS1-213ENST00000441310 PHF2O75151 1096 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 RASSF2P50749 326 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 STRN3Q13033 797 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 GIT2Q14161 759 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 CCDC137Q6PK04 289 aaKnown RBP17.88■□□□□ 0.45
PMS1-213ENST00000441310 C4orf50Q6ZRC1 276 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 CCDC105Q8IYK2 499 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 GRAMD1AQ96CP6 724 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
PMS1-213ENST00000441310 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 AJAP1Q9UKB5 411 aaPredicted RBP17.88■□□□□ 0.45
PMS1-213ENST00000441310 TMEM110-MUSTN1A8MSY1 372 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 HNRNPRO43390 633 aaKnown RBP17.88■□□□□ 0.45
PMS1-213ENST00000441310 ATP5DP30049 168 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 ERFP50548 548 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 INHBCP55103 352 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 COASYQ13057 564 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 TAF1BQ53T94 588 aaPredicted RBP17.88■□□□□ 0.45
PMS1-213ENST00000441310 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 CEP128Q6ZU80 1094 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 TMEM179Q6ZVK1 233 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms