RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZSWIM5Q9P217 1185 aa5.49□□□□□ -1.53
PTPN4-206ENST00000441089 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
PTPN4-206ENST00000441089 BRPF3Q9ULD4 1205 aa5.49□□□□□ -1.53
PTPN4-206ENST00000441089 WDR19Q8NEZ3 1342 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 SPAG17Q6Q759 2223 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 MYO9AB2RTY4 2548 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 PLXNA4Q9HCM2 1894 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 LOC102724159A0A0B4J2E5 919 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 SLC30A4O14863 429 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 PI15O43692 258 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 HMGB1P09429 215 aaKnown RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 AKR1B1P15121 316 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 HOXB8P17481 243 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 MCM5P33992 734 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 EVCP57679 992 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 TFAP4Q01664 338 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 GSTM4Q03013 218 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 PDE4CQ08493 712 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 APOBRQ0VD83 1088 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 PWP2Q15269 919 aaKnown RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 ECM1Q16610 540 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 ME3Q16798 604 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 EEPD1Q7L9B9 569 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 RAB11FIP4Q86YS3 637 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 SIAH1Q8IUQ4 282 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 NECAB1Q8N987 351 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 FAM181AQ8N9Y4 354 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 NETO1Q8TDF5 533 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 SEPT8Q92599 483 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 NECTIN4Q96NY8 510 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 KRT23Q9C075 422 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 RNF41Q9H4P4 317 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 KANSL2Q9H9L4 492 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 RC3H2Q9HBD1 1191 aaKnown RBP5.48□□□□□ -1.53
PTPN4-206ENST00000441089 LY9Q9HBG7 655 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 IL17RBQ9NRM6 502 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 TOMM22Q9NS69 142 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 USP18Q9UMW8 372 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 PLAGL2Q9UPG8 496 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 LIMCH1Q9UPQ0 1083 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 LCTP09848 1927 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
PTPN4-206ENST00000441089 FREM2Q5SZK8 3169 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PLIN4Q96Q06 1357 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 IGKV6D-41A0A0C4DH26 115 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 TMEM8BA6NDV4 472 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 IFIT3O14879 490 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 NDUFB5O43674 189 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 RANBP6O60518 1105 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 CSPG5O95196 566 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 SP9P0CG40 484 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PCP11498 1178 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 FUT4P22083 530 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PTGS1P23219 599 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 SP100P23497 879 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PMLP29590 882 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 DDIT3P35638 169 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 NOVP48745 357 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 MCM2P49736 904 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ARHGAP4P98171 946 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PDE4BQ07343 736 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 SCRN1Q12765 414 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 TRDNQ13061 729 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 CAMK1Q14012 370 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 BECN1Q14457 450 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PPP2R5BQ15173 497 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 TKFCQ3LXA3 575 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ZNF618Q5T7W0 954 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 CES5AQ6NT32 575 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 LCNL1Q6ZST4 164 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ADGRD2Q7Z7M1 963 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 RBM23Q86U06 439 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 SGMS1Q86VZ5 419 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 CCDC83Q8IWF9 413 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 GALNT12Q8IXK2 581 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ENAHQ8N8S7 591 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ASAP3Q8TDY4 903 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 MORC4Q8TE76 937 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ATP8B4Q8TF62 1192 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 RIN2Q8WYP3 895 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 DHX38Q92620 1227 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ESR2Q92731 530 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 APBB2Q92870 758 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 TMEM87BQ96K49 555 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 CTAGE1Q96RT6 745 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 MYL10Q9BUA6 226 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 SLC38A10Q9HBR0 1119 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 RAVER2Q9HCJ3 691 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 A1CFQ9NQ94 594 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 ANKFY1Q9P2R3 1169 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms