RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 SNX21Q969T3 373 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 PPP1R10Q96QC0 940 aaKnown RBP22.73■■□□□ 1.23
VIL1-204ENST00000440053 USP28Q96RU2 1077 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 TSHZ2Q9NRE2 1034 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 KCND2Q9NZV8 630 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 SRPRBQ9Y5M8 271 aaKnown RBP22.73■■□□□ 1.23
VIL1-204ENST00000440053 SMIM28A0A1B0GU29 152 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 SLC26A4O43511 780 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 RTP2Q5QGT7 225 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
VIL1-204ENST00000440053 MPZL3Q6UWV2 235 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 ALKAL1Q6UXT8 129 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
VIL1-204ENST00000440053 CCSER1Q9C0I3 900 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 HAPLN2Q9GZV7 340 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 DZANK1Q9NVP4 752 aa22.73■■□□□ 1.23
VIL1-204ENST00000440053 DDIT3P35638 169 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 CLCNKBP51801 687 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 SOX4Q06945 474 aaPredicted RBP22.72■■□□□ 1.23
VIL1-204ENST00000440053 STRN3Q13033 797 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 HERC4Q5GLZ8 1057 aaPredicted RBP22.72■■□□□ 1.23
VIL1-204ENST00000440053 FAM171A1Q5VUB5 890 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 CD300LGQ6UXG3 332 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 MYCT1Q8N699 235 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 ZMAT2Q96NC0 199 aaKnown RBP22.72■■□□□ 1.23
VIL1-204ENST00000440053 CCDC94Q9BW85 323 aaPredicted RBP22.72■■□□□ 1.23
VIL1-204ENST00000440053 ZHX3Q9H4I2 956 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 SSX2IPQ9Y2D8 614 aa22.72■■□□□ 1.23
VIL1-204ENST00000440053 TRIOO75962 3097 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 MCF2P10911 925 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 NCKAP1LP55160 1127 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 HAUS6Q7Z4H7 955 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 APBB1IPQ7Z5R6 666 aaPredicted RBP22.71■■□□□ 1.23
VIL1-204ENST00000440053 TMEM130Q8N3G9 435 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 LARP4BQ92615 738 aaKnown RBP22.71■■□□□ 1.23
VIL1-204ENST00000440053 ACAP3Q96P50 834 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 PANK2Q9BZ23 570 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 MAN1C1Q9NR34 630 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 LARSQ9P2J5 1176 aaKnown RBP22.71■■□□□ 1.23
VIL1-204ENST00000440053 ANKFY1Q9P2R3 1169 aa22.71■■□□□ 1.23
VIL1-204ENST00000440053 SPDYE4A6NLX3 237 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 KRT18P05783 430 aaKnown RBP22.7■■□□□ 1.22
VIL1-204ENST00000440053 ADH1AP07327 375 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 YARSP54577 528 aaKnown RBP22.7■■□□□ 1.22
VIL1-204ENST00000440053 XKR4Q5GH76 650 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 ATAT1Q5SQI0 421 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 SPRYD3Q8NCJ5 442 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 TFIP11Q9UBB9 837 aaKnown RBP22.7■■□□□ 1.22
VIL1-204ENST00000440053 ODF2LQ9ULJ1 636 aa22.7■■□□□ 1.22
VIL1-204ENST00000440053 SF3B1O75533 1304 aaKnown RBP eCLIP22.69■■□□□ 1.22
VIL1-204ENST00000440053 C2CD4DB7Z1M9 353 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 TOM1L1O75674 476 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 FAM13AO94988 1023 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 BRD1O95696 1058 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 MTHFRP42898 656 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 SLC39A14Q15043 492 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 GPR149Q86SP6 731 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 C3orf58Q8NDZ4 430 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 RIPOR3Q96MK2 946 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 ZSCAN16Q9H4T2 348 aaPredicted RBP22.69■■□□□ 1.22
VIL1-204ENST00000440053 KCNG1Q9UIX4 513 aa22.69■■□□□ 1.22
VIL1-204ENST00000440053 I3L4J1 428 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 TGM5O43548 720 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 RFPL2O75678 378 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 B3GAT3O94766 335 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 NMT1P30419 496 aaKnown RBP22.68■■□□□ 1.22
VIL1-204ENST00000440053 ZNF131P52739 623 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 UPP1Q16831 310 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 SLC10A6Q3KNW5 377 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 DYMQ7RTS9 669 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 LNX1Q8TBB1 728 aaPredicted RBP22.68■■□□□ 1.22
VIL1-204ENST00000440053 C18orf25Q96B23 403 aaPredicted RBP22.68■■□□□ 1.22
VIL1-204ENST00000440053 SNX27Q96L92 541 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 FIZ1Q96SL8 496 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 TTPALQ9BTX7 342 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 SFXN1Q9H9B4 322 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 PARVGQ9HBI0 331 aa22.68■■□□□ 1.22
VIL1-204ENST00000440053 CCDC195A0A1B0GUA6 201 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 CLDN3O15551 220 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 ADAM12O43184 909 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 TRAK2O60296 914 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 GLUD1P00367 558 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 MATR3P43243 847 aaKnown RBP eCLIP22.67■■□□□ 1.22
VIL1-204ENST00000440053 BRCC3P46736 316 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 NOLC1Q14978 699 aaKnown RBP eCLIP22.67■■□□□ 1.22
VIL1-204ENST00000440053 LILRA6Q6PI73 481 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 DCLRE1AQ6PJP8 1040 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 ZPBP2Q6X784 338 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 EDAQ92838 391 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 BICD1Q96G01 975 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 NECTIN4Q96NY8 510 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 CLSTN3Q9BQT9 956 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 TOPORSQ9NS56 1045 aaPredicted RBP22.67■■□□□ 1.22
VIL1-204ENST00000440053 FNIP2Q9P278 1114 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 TBX20Q9UMR3 447 aa22.67■■□□□ 1.22
VIL1-204ENST00000440053 A0A087X0B3 334 aa22.66■■□□□ 1.22
VIL1-204ENST00000440053 K7ENM7 598 aa22.66■■□□□ 1.22
VIL1-204ENST00000440053 SPAG1Q07617 926 aa22.66■■□□□ 1.22
VIL1-204ENST00000440053 MCL1Q07820 350 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms