RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ANKRD20A8PQ5CZ79 823 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 CCDC50Q8IVM0 306 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 DDX1Q92499 740 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 GTF3C4Q9UKN8 822 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 WNT10BO00744 389 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 CYP1A2P05177 515 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 PAEPP09466 180 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 MMP13P45452 471 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 CDR1P51861 262 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 NCKAP1LP55160 1127 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 WNT7BP56706 349 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 AUHQ13825 339 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 KYNUQ16719 465 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 SEPT14Q6ZU15 432 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 ANKRD42Q8N9B4 389 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 ATXN2LQ8WWM7 1075 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 GMLQ99445 158 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 CDC42EP4Q9H3Q1 356 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 CNOT10Q9H9A5 744 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 KLC4Q9NSK0 619 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 KLHL11Q9NVR0 708 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 R3HDM2Q9Y2K5 976 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 PASKQ96RG2 1323 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 TP73O15350 636 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ZNF862O60290 1169 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ACOT2P49753 483 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 MTMR2Q13614 643 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ALCAMQ13740 583 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 BAATQ14032 418 aaPredicted RBP14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SCARA3Q6AZY7 606 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ACAD10Q6JQN1 1059 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SWSAP1Q6NVH7 229 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 C12orf56Q8IXR9 622 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ART4Q93070 314 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 PGM2Q96G03 612 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 ZNF317Q96PQ6 595 aaPredicted RBP14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 PDCD2LQ9BRP1 358 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 TMEM8AQ9HCN3 771 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 TBC1D22BQ9NU19 505 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 WDR64B1ANS9 1081 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SCTRP47872 440 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SEZ6Q53EL9 994 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 C6orf118Q5T5N4 469 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 MCF2L2Q86YR7 1114 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SUGP1Q8IWZ8 645 aaKnown RBP14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 C4orf19Q8IY42 314 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 FLAD1Q8NFF5 587 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 DYDC1Q8WWB3 177 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 TAOK3Q9H2K8 898 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 AAASQ9NRG9 546 aa14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.49□□□□□ -0.09
HERPUD1-204ENST00000439977 PLSCR1O15162 318 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 RARGP13631 454 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 HSPA6P17066 643 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 TNNI1P19237 187 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 FAM133BQ5BKY9 247 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 EXOC3L1Q86VI1 746 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 MAP4K3Q8IVH8 894 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 PSPC1Q8WXF1 523 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 ZNF516Q92618 1163 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 HVCN1Q96D96 273 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 KCNK9Q9NPC2 374 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 ATXN2Q99700 1313 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 MAPTP10636 758 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 HP1BP3Q5SSJ5 553 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 PRAMEF18Q5VWM3 479 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 CCDC197Q8NCU1 140 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 GDAP1Q8TB36 358 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 CEP89Q96ST8 783 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 KIF13BQ9NQT8 1826 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 C5orf60A6NFR6 353 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 GPC3P51654 580 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 CYP24A1Q07973 514 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 ADCY2Q08462 1091 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 ZFYVE27Q5T4F4 411 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 SUPT20HQ8NEM7 779 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 IPO4Q8TEX9 1081 aaKnown RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 CCT6BQ92526 530 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 KIFAP3Q92845 792 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 C11orf70Q9BRQ4 267 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 SLC38A10Q9HBR0 1119 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 PXMP2Q9NR77 195 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 PARP2Q9UGN5 583 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 SEPT9Q9UHD8 586 aaPredicted RBP14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 EXOC7Q9UPT5 735 aa14.48□□□□□ -0.09
HERPUD1-204ENST00000439977 PLA2G6O60733 806 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 ADCY8P40145 1251 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 ITGA8P53708 1063 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 CLEC16AQ2KHT3 1053 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 NLRX1Q86UT6 975 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 ATG4CQ96DT6 458 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 ADAM33Q9BZ11 813 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 SRRM3A6NNA2 597 aaPredicted RBP14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 GH1P01241 217 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 HARSP12081 509 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 CD58P19256 250 aa14.47□□□□□ -0.09
HERPUD1-204ENST00000439977 SLMAPQ14BN4 828 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms