RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GPR65Q8IYL9 337 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 CEP120Q8N960 986 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 ZBTB45Q96K62 511 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 MRPL44Q9H9J2 332 aaKnown RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 PLEKHA5Q9HAU0 1116 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 MAGEF1Q9HAY2 307 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 ATG2AQ2TAZ0 1938 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 SMIM28A0A1B0GU29 152 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CASTOR2A6NHX0 329 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 C2CD2LO14523 706 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 B4GALT3O60512 393 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 B3GAT3O94766 335 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 PIGRP01833 764 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 ADH1AP07327 375 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CLTAP09496 248 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 NMT1P30419 496 aaKnown RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CREMQ03060 361 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 PKP1Q13835 747 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 SMAD2Q15796 467 aaKnown RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CLUL1Q15846 466 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 XKR4Q5GH76 650 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 GLRA4Q5JXX5 417 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 ANKRD54Q6NXT1 300 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 LLGL2Q6P1M3 1020 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 SFR1Q86XK3 245 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CD302Q8IX05 232 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 BCL7CQ8WUZ0 217 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 DHX58Q96C10 678 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 MSLNLQ96KJ4 702 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 SPATA32Q96LK8 384 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 KLHL5Q96PQ7 755 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 POP1Q99575 1024 aaKnown RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 TMEM206Q9H813 350 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 RPF1Q9H9Y2 349 aaKnown RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 PANK4Q9NVE7 773 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 DZANK1Q9NVP4 752 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 LAMA2P24043 3122 aaKnown RBP11.43□□□□□ -0.58
MCF2L-216ENST00000439475 CITO14578 2027 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 TRIP11Q15643 1979 aa11.43□□□□□ -0.58
MCF2L-216ENST00000439475 TMEM189-UBE2V1I3L0A0 370 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 OGTO15294 1046 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 POLR2DO15514 142 aaKnown RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 GCNT3O95395 438 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 GLP2RO95838 553 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 KCNE1P15382 129 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 NUCB2P80303 420 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 DSG1Q02413 1049 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 ITIH3Q06033 890 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 KCNC3Q14003 757 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 KIAA0319Q5VV43 1072 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 ADALQ6DHV7 355 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SHC4Q6S5L8 630 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 ALKAL1Q6UXT8 129 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 RNF168Q8IYW5 571 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 GJD3Q8N144 294 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SMRP1Q8NCR6 262 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 AUTS2Q8WXX7 1259 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 DNAJC19Q96DA6 116 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SNX27Q96L92 541 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 PPP1R10Q96QC0 940 aaKnown RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 MSTO1Q9BUK6 570 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 SCAND2PQ9GZW5 306 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-216ENST00000439475 OLFML3Q9NRN5 406 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
MCF2L-216ENST00000439475 CDH23Q9H251 3354 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 A0A087X0B3 334 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 ABLIM1O14639 778 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 LILRB3O75022 631 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 C1RP00736 705 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 CNPP09543 421 aaKnown RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 POU5F1Q01860 360 aaKnown RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 SLC10A6Q3KNW5 377 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 ZC2HC1CQ53FD0 456 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 ATAT1Q5SQI0 421 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 FAM171A1Q5VUB5 890 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 TAS1R1Q7RTX1 841 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 CEP57Q86XR8 500 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 RIN2Q8WYP3 895 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 RABGGTAQ92696 567 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 STAMQ92783 540 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms