RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 HIP1RO75146 1068 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 ECEL1O95672 775 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 EPHB2P29323 1055 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 HOXA13P31271 388 aaPredicted RBP14.49□□□□□ -0.09
PCNX3-202ENST00000439247 ITGA8P53708 1063 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 SESN3P58005 492 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 TBC1D10BQ4KMP7 808 aaPredicted RBP14.49□□□□□ -0.09
PCNX3-202ENST00000439247 TMEM63BQ5T3F8 832 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 CC2D2BQ6DHV5 1058 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 RTKN2Q8IZC4 609 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 GBP7Q8N8V2 638 aaPredicted RBP14.49□□□□□ -0.09
PCNX3-202ENST00000439247 LENG9Q96B70 501 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 DDX4Q9NQI0 724 aaKnown RBP14.49□□□□□ -0.09
PCNX3-202ENST00000439247 NAALADL1Q9UQQ1 740 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 CHKBQ9Y259 395 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 DAGLAQ9Y4D2 1042 aa14.49□□□□□ -0.09
PCNX3-202ENST00000439247 BRCA1P38398 1863 aaKnown RBP14.49□□□□□ -0.09
PCNX3-202ENST00000439247 GTPBP10A4D1E9 387 aaKnown RBP14.48□□□□□ -0.09
PCNX3-202ENST00000439247 NFKBIEO00221 500 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 MEIS2O14770 477 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 PCK1P35558 622 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 WDR4P57081 412 aaKnown RBP14.48□□□□□ -0.09
PCNX3-202ENST00000439247 LARGE2Q8N3Y3 721 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 FAM13CQ8NE31 585 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 SYT15Q9BQS2 421 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 ZCWPW1Q9H0M4 648 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 RABGAP1Q9Y3P9 1069 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 THAP12O43422 761 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 BMT2Q1RMZ1 405 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 EGFL6Q8IUX8 553 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 SERPINB12Q96P63 405 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 O00370 1275 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 KIF3CO14782 793 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 FAM13AO94988 1023 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 TTLL1O95922 423 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 PRELPP51888 382 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 GPC5P78333 572 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 MTFR1Q15390 333 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 CAPN12Q6ZSI9 719 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 RHOT2Q8IXI1 618 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 NUDCD1Q96RS6 583 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 ROPN1BQ9BZX4 212 aaPredicted RBP14.48□□□□□ -0.09
PCNX3-202ENST00000439247 TAOK3Q9H2K8 898 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 ROPN1Q9HAT0 212 aaPredicted RBP14.48□□□□□ -0.09
PCNX3-202ENST00000439247 NINJ2Q9NZG7 142 aa14.48□□□□□ -0.09
PCNX3-202ENST00000439247 TTC4O95801 387 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 TPBGLP0DKB5 382 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 TMED2Q15363 201 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 C2CD6Q53TS8 623 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 INTS8Q75QN2 995 aaKnown RBP14.47□□□□□ -0.09
PCNX3-202ENST00000439247 LONP2Q86WA8 852 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 CD101Q93033 1021 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 RUNDC3BQ96NL0 473 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 EIF2AK1Q9BQI3 630 aaKnown RBP14.47□□□□□ -0.09
PCNX3-202ENST00000439247 NUP85Q9BW27 656 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 RNPEPL1Q9HAU8 725 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 GRID1Q9ULK0 1009 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
PCNX3-202ENST00000439247 NUMBLQ9Y6R0 609 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 ATP8B3O60423 1300 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 MSH4O15457 936 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 GCLMP48507 274 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 KIF22Q14807 665 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 SGO2Q562F6 1265 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 CYP4F22Q6NT55 531 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 LLGL2Q6P1M3 1020 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 TRMT10CQ7L0Y3 403 aaKnown RBP14.47□□□□□ -0.09
PCNX3-202ENST00000439247 LMO3Q8TAP4 145 aa14.47□□□□□ -0.09
PCNX3-202ENST00000439247 ZNF646O15015 1829 aaPredicted RBP14.47□□□□□ -0.09
PCNX3-202ENST00000439247 MIF4GDA9UHW6 222 aaKnown RBP14.46□□□□□ -0.09
PCNX3-202ENST00000439247 T-ENOLP0DO92 83 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 CALB2P22676 271 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 STRIP1Q5VSL9 837 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 C11orf63Q6NUN7 778 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 NOP9Q86U38 636 aaKnown RBP14.46□□□□□ -0.09
PCNX3-202ENST00000439247 SLC47A2Q86VL8 602 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 MAGEB18Q96M61 343 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 TBC1D10AQ9BXI6 508 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 HEMGNQ9BXL5 484 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 FHDC1Q9C0D6 1143 aaPredicted RBP14.46□□□□□ -0.09
PCNX3-202ENST00000439247 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 MTUS1Q9ULD2 1270 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 R3HDM2Q9Y2K5 976 aaKnown RBP14.46□□□□□ -0.09
PCNX3-202ENST00000439247 GAKO14976 1311 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 EMSYQ7Z589 1322 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 EXOC3O60645 756 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 PIAS1O75925 651 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 IVDP26440 423 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 CYP1B1Q16678 543 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 RNF43Q68DV7 783 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 RHBDF2Q6PJF5 856 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 CYFIP1Q7L576 1253 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 ZNF564Q8TBZ8 553 aaPredicted RBP14.46□□□□□ -0.09
PCNX3-202ENST00000439247 RPS6KC1Q96S38 1066 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 SH3GL3Q99963 347 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms