RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 EIF2AK1Q9BQI3 630 aaKnown RBP16.8■□□□□ 0.28
DHFR-201ENST00000439211 PARVGQ9HBI0 331 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 ACSL3O95573 720 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 LMNB1P20700 586 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 MARK3P27448 753 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 MYL7Q01449 175 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 DR1Q01658 176 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 VPS72Q15906 364 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
DHFR-201ENST00000439211 SEL1L2Q5TEA6 688 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 SESTD1Q86VW0 696 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 TPCN2Q8NHX9 752 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 CCDC127Q96BQ5 260 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 CATSPER2Q96P56 530 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 AIPL1Q9NZN9 384 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 GH2P01242 217 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 VPS41P49754 854 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 CYLC2Q14093 348 aaPredicted RBP16.79■□□□□ 0.28
DHFR-201ENST00000439211 UBL4BQ8N7F7 174 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 UBE2TQ9NPD8 197 aaPredicted RBP16.79■□□□□ 0.28
DHFR-201ENST00000439211 PDXKO00764 312 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 FOSP01100 380 aaPredicted RBP16.79■□□□□ 0.28
DHFR-201ENST00000439211 BRAFP15056 766 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 CALCOCO2Q13137 446 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 PPM1KQ8N3J5 372 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 GLG1Q92896 1179 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 FAM81BQ96LP2 452 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 SH3GLB1Q9Y371 365 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 TSC22D4Q9Y3Q8 395 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
DHFR-201ENST00000439211 ANKRD62A6NC57 917 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 K7ENM7 598 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 BCRP11274 1271 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 BMP3P12645 472 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 ALOX15P16050 662 aaPredicted RBP16.78■□□□□ 0.28
DHFR-201ENST00000439211 TNIP1Q15025 636 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 SYDE2Q5VT97 1194 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 SEPT12Q8IYM1 358 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 INPP4AQ96PE3 977 aaPredicted RBP16.78■□□□□ 0.28
DHFR-201ENST00000439211 ZNF180Q9UJW8 692 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 CRKP46108 304 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 RIBC1Q8N443 379 aaPredicted RBP16.78■□□□□ 0.28
DHFR-201ENST00000439211 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 COMMD3-BMI1R4GMX3 469 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 MAFGO15525 162 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 DKC1O60832 514 aaKnown RBP eCLIP16.78■□□□□ 0.288e-28■■□□□ 13.8
DHFR-201ENST00000439211 PEX11AO75192 247 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 LCA5LO95447 670 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 KLC3Q6P597 504 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
DHFR-201ENST00000439211 TBC1D10AQ9BXI6 508 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 BCAS3Q9H6U6 928 aa16.78■□□□□ 0.28
DHFR-201ENST00000439211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.77■□□□□ 0.28
DHFR-201ENST00000439211 O00370 1275 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 GYG2O15488 501 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 RPA1P27694 616 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 SHMT1P34896 483 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.28
DHFR-201ENST00000439211 CPXCR1Q8N123 301 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 UBAP1Q9NZ09 502 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 ZBTB39O15060 712 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 COBLL1Q53SF7 1204 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 ARHGEF18Q6ZSZ5 1173 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 MRRFQ96E11 262 aaKnown RBP16.77■□□□□ 0.28
DHFR-201ENST00000439211 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
DHFR-201ENST00000439211 WFS1O76024 890 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 PDE5AO76074 875 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 FUT4P22083 530 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 GALK1P51570 392 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 PSMD7P51665 324 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 IL9RQ01113 521 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 SP4Q02446 784 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.27
DHFR-201ENST00000439211 ZNF572Q7Z3I7 529 aaPredicted RBP16.77■□□□□ 0.27
DHFR-201ENST00000439211 RAB3IL1Q8TBN0 382 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 PTPRN2Q92932 1015 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 RMDN2Q96LZ7 410 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 CIB2O75838 187 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 TROVE2P10155 538 aaKnown RBP eCLIP16.77■□□□□ 0.274e-14■■□□□ 12
DHFR-201ENST00000439211 IL1R1P14778 569 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 LONRF1Q17RB8 773 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 ARSHQ5FYA8 562 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 LRRC74BQ6ZQY2 392 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 TRIM50Q86XT4 487 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 ATL2Q8NHH9 583 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 DNAJC1Q96KC8 554 aaKnown RBP16.77■□□□□ 0.27
DHFR-201ENST00000439211 PABPC3Q9H361 631 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms