RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RPS6KA4O75676 772 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 SCAF4O95104 1147 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZSCAN20P17040 1043 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 MGAT1P26572 445 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 ADSLP30566 484 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 APOBEC3AP31941 199 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 GUCY1A2P33402 732 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 CDKN1CP49918 316 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 HSPA2P54652 639 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 SRSF2Q01130 221 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 MALLQ13021 153 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 SP140Q13342 867 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 FAM102AQ5T9C2 384 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 FAM180AQ6UWF9 173 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 TRMT2AQ8IZ69 625 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLC35B2Q8TB61 432 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 PUS7LQ9H0K6 701 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 CCM2LQ9NUG4 571 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 SIK3Q9Y2K2 1263 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 REXO2Q9Y3B8 237 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 WDR33Q9C0J8 1336 aaKnown RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 CXorf49A8MYA2 514 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 RBP3P10745 1247 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 CDK11BP21127 795 aaKnown RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 AGXTP21549 392 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLC5A3P53794 718 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 CLRN1P58418 232 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 FAM189BP81408 668 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 NHLH2Q02577 135 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 KLF1Q13351 362 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 EFCAB12Q6NXP0 572 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 GDF7Q7Z4P5 450 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 NECAB2Q7Z6G3 386 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 CBARPQ8N350 705 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 REPS2Q8NFH8 660 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 ACE2Q9BYF1 805 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 SPON1Q9HCB6 807 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 DNAJC28Q9NX36 388 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 MCM8Q9UJA3 840 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 MAPKBP1O60336 1514 aa4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 MAGI1Q96QZ7 1491 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P12-201ENST00000438745 ABCC8Q09428 1581 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 TMEM191CA6NGB0 347 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 DRGXA6NNA5 263 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 LAG3P18627 525 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 PTPN7P35236 360 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 BMPR1AP36894 532 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 WASP42768 502 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLC6A9P48067 706 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 CCT2P78371 535 aaKnown RBP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 MGAT2Q10469 447 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 SEPT2Q15019 361 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 CRB2Q5IJ48 1285 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 MBNL2Q5VZF2 373 aaKnown RBP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 OTUD7BQ6GQQ9 843 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 PRPF38AQ8NAV1 312 aaKnown RBP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 OR10H5Q8NGA6 315 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZFP28Q8NHY6 868 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 TFAP2CQ92754 450 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 EIF2B4Q9UI10 523 aaKnown RBP4.48□□□□□ -1.69
HMGB3P12-201ENST00000438745 A0A087X1B8 175 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 RNASET2O00584 256 aaKnown RBP4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZNF185O15231 689 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 IL2RBP14784 551 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 ECHS1P30084 290 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 COL10A1Q03692 680 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 BEAN1Q3B7T3 259 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 LY6G5CQ5SRR4 150 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 LAIR1Q6GTX8 287 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 ARHGEF19Q8IW93 802 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 ANKRD13AQ8IZ07 590 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 SYNE4Q8N205 404 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 PQLC1Q8N2U9 271 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 CNTD1Q8N815 330 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 CASKIN2Q8WXE0 1202 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 SSH1Q8WYL5 1049 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 CYFIP2Q96F07 1278 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 NEU1Q99519 415 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 AKIP1Q9NQ31 210 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 DMRT3Q9NQL9 472 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 PCDHGA2Q9Y5H1 932 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 DMRT1Q9Y5R6 373 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 GPR45Q9Y5Y3 372 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 PTPRMP28827 1452 aa4.47□□□□□ -1.69
HMGB3P12-201ENST00000438745 WASHC2AQ641Q2 1341 aa4.46□□□□□ -1.69
HMGB3P12-201ENST00000438745 CEP170Q5SW79 1584 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 GRIN2BQ13224 1484 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms