RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 EGFL8Q99944 293 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 PCSK1NQ9UHG2 260 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 TARSL2A2RTX5 802 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 ERAP1Q9NZ08 941 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 FBXW4P57775 412 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 EXOSC10Q01780 885 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 EFTUD2Q15029 972 aaKnown RBP eCLIP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 TRADDQ15628 312 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 GPRC5AQ8NFJ5 357 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 NRXN1Q9ULB1 1477 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 RRN3P2A6NIE6 340 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 HIF1AQ16665 826 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 SARS2Q9NP81 518 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 RRP15Q9Y3B9 282 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 A0A0G2JND7 137 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 FAM151AQ8WW52 585 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 VPS11Q9H270 941 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 ZFP69BQ9UJL9 534 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SLIT1O75093 1534 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 GYG2O15488 501 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 CXorf38Q8TB03 319 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 RDM1Q8NG50 284 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 RNF25Q96BH1 459 aaPredicted RBP16.75■□□□□ 0.27
PTPN13-204ENST00000436978 GCKP35557 465 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 EMC2Q15006 297 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 MAPRE2Q15555 327 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SCFD1Q8WVM8 642 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.75■□□□□ 0.27
PTPN13-204ENST00000436978 HADHAP40939 763 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 TAS2R42Q7RTR8 314 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SH3KBP1Q96B97 665 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
PTPN13-204ENST00000436978 PPARGC1AQ9UBK2 798 aaKnown RBP16.75■□□□□ 0.27
PTPN13-204ENST00000436978 PCDHB7Q9Y5E2 793 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 NDFIP2Q9NV92 336 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SNAP23O00161 211 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 SENP1Q9P0U3 644 aa16.75■□□□□ 0.27
PTPN13-204ENST00000436978 TPX2Q9ULW0 747 aaKnown RBP16.75■□□□□ 0.27
PTPN13-204ENST00000436978 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 CDC42EP5Q6NZY7 148 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 ATPAF2Q8N5M1 289 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 TRMT10CQ7L0Y3 403 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 AGBL3Q8NEM8 1001 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 KRT35Q92764 455 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 UVRAGQ9P2Y5 699 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 PDIA2Q13087 525 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 ANKS3Q6ZW76 656 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 PDHBP11177 359 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 ST8SIA6P61647 398 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SCHIP1Q9P0W5 487 aaPredicted RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 NDUFB10O96000 172 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 MCF2P10911 925 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 CASP1P29466 404 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SNRNP35Q16560 246 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 ANGEL2Q5VTE6 544 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 NOTUMQ6P988 496 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 RMDN1Q96DB5 314 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 ITIH6Q6UXX5 1313 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 MAP4P27816 1152 aaKnown RBP16.74■□□□□ 0.27
PTPN13-204ENST00000436978 NCOA4Q13772 614 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 FOPNLQ96NB1 174 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SLC7A5P2Q9GIP4 190 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
PTPN13-204ENST00000436978 PSMD14O00487 310 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 SRGAP2O75044 1071 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 E2F6O75461 281 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 EIF3EP60228 445 aaKnown RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 XAB2Q9HCS7 855 aaKnown RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 ZBED8Q8IZ13 594 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 OTUB1Q96FW1 271 aaPredicted RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 VCPKMTQ9H867 229 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 CEP19Q96LK0 163 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 SIK2Q9H0K1 926 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 ARSEP51690 589 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 SHC4Q6S5L8 630 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 PPCSQ9HAB8 311 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 TTC7AQ9ULT0 858 aaPredicted RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 RPLP2P05387 115 aaKnown RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 PCSK1P29120 753 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 NFRKBQ6P4R8 1299 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms