RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 TMEM189-UBE2V1I3L0A0 370 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 SLC16A4O15374 487 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 C1RP00736 705 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 IGFBP6P24592 240 aaPredicted RBP17.3■□□□□ 0.36
NUP50-210ENST00000434760 RAD51AP2Q09MP3 1159 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 ZRSR1Q15695 479 aaKnown RBP17.3■□□□□ 0.36
NUP50-210ENST00000434760 ARSHQ5FYA8 562 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 ZDHHC14Q8IZN3 488 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 TMEM161BQ8NDZ6 487 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 SPIRE2Q8WWL2 714 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 RIN2Q8WYP3 895 aaPredicted RBP17.3■□□□□ 0.36
NUP50-210ENST00000434760 PIK3R5Q8WYR1 880 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 KCNN1Q92952 543 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
NUP50-210ENST00000434760 SNX27Q96L92 541 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 AK8Q96MA6 479 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 PLIN2Q99541 437 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
NUP50-210ENST00000434760 SFI1A8K8P3 1242 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 SLC26A4O43511 780 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 TGM5O43548 720 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 N4BP1O75113 896 aaKnown RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 RFPL2O75678 378 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 MAPTP10636 758 aaKnown RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 PLS3P13797 630 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 RPL17P18621 184 aaKnown RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 SOX4Q06945 474 aaPredicted RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 ATAT1Q5SQI0 421 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 LILRA6Q6PI73 481 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 PRSS55Q6UWB4 352 aaPredicted RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 ALKAL1Q6UXT8 129 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 CCDC149Q6ZUS6 474 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 FAM122AQ96E09 287 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 NTPCRQ9BSD7 190 aaKnown RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 SMOC2Q9H3U7 446 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 GOLGA2P5Q9HBQ8 144 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
NUP50-210ENST00000434760 MYO15AQ9UKN7 3530 aa17.29■□□□□ 0.36
NUP50-210ENST00000434760 NPHP3-ACAD11A0A0J9YXS1 232 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 ASGR2P07307 311 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 MCF2P10911 925 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
NUP50-210ENST00000434760 CREMQ03060 361 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 MPZL3Q6UWV2 235 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 KREMEN2Q8NCW0 462 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 HDAC7Q8WUI4 952 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
NUP50-210ENST00000434760 REEP2Q9BRK0 252 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 BACH2Q9BYV9 841 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 SORCS3Q9UPU3 1222 aa17.28■□□□□ 0.36
NUP50-210ENST00000434760 CLUHO75153 1309 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 SMIM28A0A1B0GU29 152 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
NUP50-210ENST00000434760 ADAM12O43184 909 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 TADA2AO75478 443 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 BMP15O95972 392 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 PLCG1P19174 1290 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 CLCNKBP51801 687 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 ZNF131P52739 623 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 NCKAP1LP55160 1127 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 RESTQ13127 1097 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 MTMR3Q13615 1198 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 PTPAQ15257 358 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
NUP50-210ENST00000434760 PSMD5Q16401 504 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 UPP1Q16831 310 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 FAM171A1Q5VUB5 890 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 APBB1IPQ7Z5R6 666 aaPredicted RBP17.27■□□□□ 0.36
NUP50-210ENST00000434760 GLYCTKQ8IVS8 523 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 LNX1Q8TBB1 728 aaPredicted RBP17.27■□□□□ 0.36
NUP50-210ENST00000434760 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 CLSTN3Q9BQT9 956 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
NUP50-210ENST00000434760 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 TOM1L1O75674 476 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 SPATA31D3P0C874 917 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 MYBP10242 640 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 KCNE1P15382 129 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 FGFR3P22607 806 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 LONP1P36776 959 aaKnown RBP17.26■□□□□ 0.35
NUP50-210ENST00000434760 ELAVL2Q12926 359 aaKnown RBP17.26■□□□□ 0.35
NUP50-210ENST00000434760 NOLC1Q14978 699 aaKnown RBP eCLIP17.26■□□□□ 0.35
NUP50-210ENST00000434760 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
NUP50-210ENST00000434760 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 ZPBP2Q6X784 338 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
NUP50-210ENST00000434760 SPATA31D4Q6ZUB0 917 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 ZBTB33Q86T24 672 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 PALB2Q86YC2 1186 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 ZBTB45Q96K62 511 aaPredicted RBP17.26■□□□□ 0.35
NUP50-210ENST00000434760 MFSD14AQ96MC6 490 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
NUP50-210ENST00000434760 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms