RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PLEKHO2Q8TD55 490 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 NINJ2Q9NZG7 142 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 PI4K2BG5E9Z4 385 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 GNAT1P11488 350 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 RPL13P26373 211 aaKnown RBP11.17□□□□□ -0.62
SCAF4-203ENST00000434667 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 RASIP1Q5U651 963 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-203ENST00000434667 APBB1IPQ7Z5R6 666 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-203ENST00000434667 ZC3H3Q8IXZ2 948 aaKnown RBP11.17□□□□□ -0.62
SCAF4-203ENST00000434667 TBC1D22AQ8WUA7 517 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 CKAP2Q8WWK9 683 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 ZNF287Q9HBT7 754 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
SCAF4-203ENST00000434667 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-203ENST00000434667 A0A1W2PPM1 405 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 PEX11AO75192 247 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 BMP3P12645 472 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 ALADP13716 330 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 PPP4CP60510 307 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 ATP13A4Q4VNC1 1196 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 ASPRV1Q53RT3 343 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
SCAF4-203ENST00000434667 FAM178BQ8IXR5 827 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 ZNF564Q8TBZ8 553 aaPredicted RBP11.16□□□□□ -0.62
SCAF4-203ENST00000434667 P3H4Q92791 437 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 KIFC3Q9BVG8 833 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 NCANO14594 1321 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 KRT15P19012 456 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CTNNA2P26232 953 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CPA2P48052 419 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 RIPK1Q13546 671 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CNBD1Q8NA66 436 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 DLGAP2Q9P1A6 1054 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 ZFATQ9P243 1243 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CFBP00751 764 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 GSTO1P78417 241 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 GAD2Q05329 585 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
SCAF4-203ENST00000434667 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 HYIQ5T013 277 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 TTC16Q8NEE8 873 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 CYTH2Q99418 400 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
SCAF4-203ENST00000434667 NPHS2Q9NP85 383 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
SCAF4-203ENST00000434667 PARP14Q460N5 1801 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 IFNB1P01574 187 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 LDHCP07864 332 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 RPA1P27694 616 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 SHMT1P34896 483 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 GPC5P78333 572 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 BLMHQ13867 455 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 SEPT2Q15019 361 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 SETDB1Q15047 1291 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PKN2Q16513 984 aaKnown RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 TMEM154Q6P9G4 183 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 DSTYKQ6XUX3 929 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 FAM43BQ6ZT52 329 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 CPA5Q8WXQ8 436 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PASKQ96RG2 1323 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 UNC5CO95185 931 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 T-ENOLP0DO92 83 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 CD58P19256 250 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 RPA3P35244 121 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PTDSS1P48651 473 aaKnown RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 MTMR2Q13614 643 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 EFTUD2Q15029 972 aaKnown RBP eCLIP11.15□□□□□ -0.625e-7■■■■■ 28.8
SCAF4-203ENST00000434667 ZYXQ15942 572 aaKnown RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 KHDC1Q4VXA5 237 aaKnown RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 TAF1BQ53T94 588 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 NAP1L3Q99457 506 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-203ENST00000434667 UBN1Q9NPG3 1134 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PRKAG3Q9UGI9 489 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 POLLQ9UGP5 575 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 PHTF1Q9UMS5 762 aa11.15□□□□□ -0.62
SCAF4-203ENST00000434667 CFHP08603 1231 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 KRT10P13645 584 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 NPEPPSP55786 919 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 SLC1A5Q15758 541 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 ANKMY2Q8IV38 441 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.63
SCAF4-203ENST00000434667 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 SYNGAP1Q96PV0 1343 aa11.15□□□□□ -0.63
SCAF4-203ENST00000434667 SLITRK3O94933 977 aa11.14□□□□□ -0.63
SCAF4-203ENST00000434667 SOX10P56693 466 aa11.14□□□□□ -0.63
SCAF4-203ENST00000434667 NOP14P78316 857 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms