RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 DNAJB3Q8WWF6 145 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 ACO2Q99798 780 aaKnown RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 MSTO1Q9BUK6 570 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 HAPLN2Q9GZV7 340 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 MINDY3Q9H8M7 445 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 KIAA1586Q9HCI6 787 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 AGO2Q9UKV8 859 aaKnown RBP12.25□□□□□ -0.45
LINC00539-203ENST00000434601 SIK3Q9Y2K2 1263 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 MTCH2Q9Y6C9 303 aa12.25□□□□□ -0.45
LINC00539-203ENST00000434601 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 GPR32O75388 356 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 LDHAP00338 332 aaKnown RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 GYPCP04921 128 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 RPLP2P05387 115 aaKnown RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 TRIM49P0CI25 452 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 TRIM49CP0CI26 452 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 BMP1P13497 986 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 PROZP22891 400 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 KLK7P49862 253 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 VAMP7P51809 220 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 TAP1Q03518 808 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ENPEPQ07075 957 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 MCL1Q07820 350 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 CYP24A1Q07973 514 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 RBL2Q08999 1139 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 TMEM62Q0P6H9 643 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 AMHR2Q16671 573 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 TMEM132AQ24JP5 1023 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 GDF6Q6KF10 455 aaPredicted RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 CNKSR3Q6P9H4 555 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 MPZL3Q6UWV2 235 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 LRRC8DQ7L1W4 858 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ARNTL2Q8WYA1 636 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 IQCDQ96DY2 449 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ZBTB45Q96K62 511 aaPredicted RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 NUP58Q9BVL2 599 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 GCOM2Q9BZD3 368 aaPredicted RBP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ADAMTS10Q9H324 1103 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
LINC00539-203ENST00000434601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00539-203ENST00000434601 ABHD14A-ACY1A0A1B0GW23 586 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 ABLIM1O14639 778 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 CLDN3O15551 220 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 B4GALT5O43286 388 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 TSPAN1O60635 241 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 MFAP3LO75121 409 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 ERLIN2O94905 339 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 CXCL10P02778 98 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 HARSP12081 509 aaKnown RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 FMO5P49326 533 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 WDR5P61964 334 aaKnown RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 MYL7Q01449 175 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 PTK7Q13308 1070 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 PCBP1Q15365 356 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 ZNF568Q3ZCX4 644 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 USP37Q86T82 979 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 CNGA4Q8IV77 575 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 LRRC8AQ8IWT6 810 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 NME8Q8N427 588 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 MFSD14AQ96MC6 490 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 OSMRQ99650 979 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 LSM14BQ9BX40 385 aaKnown RBP12.23□□□□□ -0.45
LINC00539-203ENST00000434601 TTYH3Q9C0H2 523 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 CERS4Q9HA82 394 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 TNFSF13BQ9Y275 285 aa12.23□□□□□ -0.45
LINC00539-203ENST00000434601 MICAL3Q7RTP6 2002 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 RFXAPO00287 272 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 OGTO15294 1046 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 CKBP12277 381 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 DARSP14868 501 aaKnown RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 CASP14P31944 242 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 DLG4P78352 724 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 LRMPQ12912 555 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 IKBKEQ14164 716 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 EEF1DP3Q658K8 133 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms