RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 TUBGCP2Q9BSJ2 902 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 RNF216Q9NWF9 866 aaPredicted RBP25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 PCDH10Q9P2E7 1040 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 TULP1O00294 542 aaPredicted RBP25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 BAIAP3O94812 1187 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 EOMESO95936 686 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 AKAP5P24588 427 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 FAM189BP81408 668 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 MAN2A1Q16706 1144 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 SLC10A6Q3KNW5 377 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 TCERG1LQ5VWI1 586 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 ZNF598Q86UK7 904 aaKnown RBP25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 CD302Q8IX05 232 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 PARD3BQ8TEW8 1205 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 CCDC127Q96BQ5 260 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 ELAC1Q9H777 363 aaKnown RBP25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 PLEKHA5Q9HAU0 1116 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 TAB2Q9NYJ8 693 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 GIT1Q9Y2X7 761 aa25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.19■■□□□ 1.62
SMARCAL1-208ENST00000434435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 TTC26A0AVF1 554 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 PRKCSHP14314 528 aaPredicted RBP25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 GSE1Q14687 1217 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 PSRC1Q6PGN9 363 aaPredicted RBP25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 PLEKHO2Q8TD55 490 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 LPPQ93052 612 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 CGRRF1Q99675 332 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 RNF39Q9H2S5 420 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 ASB7Q9H672 318 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 PDE11AQ9HCR9 933 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 UBN1Q9NPG3 1134 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 TMEM161AQ9NX61 479 aa25.18■■□□□ 1.62
SMARCAL1-208ENST00000434435 FSD2A1L4K1 749 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 LACTBL1A8MY62 500 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 SERPINC1P01008 464 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 TRIM49P0CI25 452 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 TRIM49CP0CI26 452 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 DLATP10515 647 aaKnown RBP25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 COPB1P53618 953 aaKnown RBP25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 WNT7BP56706 349 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 FANCCQ00597 558 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 AGMOQ6ZNB7 445 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 SLC35C1Q96A29 364 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 RSAD1Q9HA92 442 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 LRFN2Q9ULH4 789 aa25.17■■□□□ 1.62
SMARCAL1-208ENST00000434435 LRRIQ3A6PVS8 624 aaPredicted RBP25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 STX10O60499 249 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 MCCD1P59942 119 aaPredicted RBP25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 NPAS4Q8IUM7 802 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 RPS6KC1Q96S38 1066 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 KLK14Q9P0G3 267 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 CNTN3Q9P232 1028 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 PCDHB7Q9Y5E2 793 aa25.16■■□□□ 1.62
SMARCAL1-208ENST00000434435 MEIS3P2A8K0S8 358 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 PES1O00541 588 aaKnown RBP25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 MEFVO15553 781 aaPredicted RBP25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 FGBP02675 491 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 AMHP03971 560 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 TNNI1P19237 187 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 DLG4P78352 724 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 PLCB2Q00722 1185 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 FILIP1LQ4L180 1135 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 VWA3BQ502W6 1294 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 WDR49Q8IV35 697 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 VPS16Q9H269 839 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 GRPEL1Q9HAV7 217 aa25.15■■□□□ 1.62
SMARCAL1-208ENST00000434435 LRRC10BA6NIK2 292 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 AFPP02771 609 aaKnown RBP25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 MLH1P40692 756 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 KCNJ6P48051 423 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 KCNH2Q12809 1159 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 XKR4Q5GH76 650 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 TMEM240Q5SV17 173 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 JADE1Q6IE81 842 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 ALKAL1Q6UXT8 129 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 ZNF365Q70YC5 407 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 C16orf59Q7L2K0 433 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 APTXQ7Z2E3 356 aaKnown RBP25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 NT5DC4Q86YG4 428 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 EFCAB13Q8IY85 973 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 KIF12Q96FN5 646 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 TSPAN18Q96SJ8 248 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 DERAQ9Y315 318 aa25.14■■□□□ 1.62
SMARCAL1-208ENST00000434435 HOXA2O43364 376 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 N4BP1O75113 896 aaKnown RBP25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 NFICP08651 508 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 GTF2H1P32780 548 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 AP3M2P53677 418 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 EPHB4P54760 987 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 WDR5P61964 334 aaKnown RBP25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 CLDN10P78369 228 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 TMEM132DQ14C87 1099 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 MIIPQ5JXC2 388 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 C1orf220Q5T0J3 134 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 SARM1Q6SZW1 724 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 GLB1LQ6UWU2 654 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 OTOP2Q7RTS6 562 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 ANKRD36BP1Q96IX9 119 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms