RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 ANKS4BQ8N8V4 417 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 GPRASP2Q96D09 838 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 SERPINB12Q96P63 405 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 NSRP1Q9H0G5 558 aaKnown RBP14.63□□□□□ -0.07
COL6A3-207ENST00000433762 DCDC2CA8MYV0 355 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 TISP43B9A030 160 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 GRIN3BO60391 1043 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 RARAP10276 462 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 NPTX2P47972 431 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 CYP24A1Q07973 514 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 ANKRD20A8PQ5CZ79 823 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 PIGWQ7Z7B1 504 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 CCDC197Q8NCU1 140 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 MCPH1Q8NEM0 835 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 SEMA4DQ92854 862 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 KAT5Q92993 513 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 TACO1Q9BSH4 297 aaKnown RBP14.63□□□□□ -0.07
COL6A3-207ENST00000433762 ADAM7Q9H2U9 754 aa14.63□□□□□ -0.07
COL6A3-207ENST00000433762 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CTNND1O60716 968 aaKnown RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 DNAJC8O75937 253 aaPredicted RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 SHBGP04278 402 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CHN1P15882 459 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CHRNA5P30532 468 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CENPCQ03188 943 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 PTK6Q13882 451 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 RHBDF2Q6PJF5 856 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 TRIM72Q6ZMU5 477 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 C15orf39Q6ZRI6 1047 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 ADAT2Q7Z6V5 191 aaKnown RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CBWD2Q8IUF1 395 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 BBOF1Q8ND07 529 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 CCT6BQ92526 530 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 FOXP3Q9BZS1 431 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 UNGP13051 313 aaPredicted RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 COPB2P35606 906 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 QPCTQ16769 361 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 RELL1Q8IUW5 271 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 GPD1LQ8N335 351 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 MAGEC3Q8TD91 643 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 ATP6V0A1Q93050 837 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 PDCD2LQ9BRP1 358 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 MOV10L1Q9BXT6 1211 aaKnown RBP14.62□□□□□ -0.07
COL6A3-207ENST00000433762 OSBPL7Q9BZF2 842 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 SEMA4AQ9H3S1 761 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 YY1AP1Q9H869 796 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 KMT5AQ9NQR1 393 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
COL6A3-207ENST00000433762 NFASCO94856 1347 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 KIAA1217Q5T5P2 1943 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 XRCC4Q13426 336 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 UGCGQ16739 394 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 FAM102BQ5T8I3 360 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 FBXW10Q5XX13 1052 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 AADACL2Q6P093 401 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 MAEAQ7L5Y9 396 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 SNF8Q96H20 258 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 ZNF341Q9BYN7 854 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 PCDHB2Q9Y5E7 798 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 DENND3A2RUS2 1198 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 PHF20L1A8MW92 1017 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 ANKRD63C9JTQ0 380 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 DGAT1O75907 488 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 GAS8O95995 478 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
COL6A3-207ENST00000433762 AUHQ13825 339 aaKnown RBP14.61□□□□□ -0.07
COL6A3-207ENST00000433762 R3HDM1Q15032 1099 aaKnown RBP14.61□□□□□ -0.07
COL6A3-207ENST00000433762 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
COL6A3-207ENST00000433762 RPAINQ86UA6 219 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 TMEM39BQ9GZU3 492 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 PDLIM7Q9NR12 457 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 INTS9Q9NV88 658 aaKnown RBP14.61□□□□□ -0.07
COL6A3-207ENST00000433762 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
COL6A3-207ENST00000433762 PSTPIP1O43586 416 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 SORBS3O60504 671 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
COL6A3-207ENST00000433762 PPP1R7Q15435 360 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 SGO2Q562F6 1265 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 SV2AQ7L0J3 742 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 NLRX1Q86UT6 975 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 MCOLN2Q8IZK6 566 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 TAS1R2Q8TE23 839 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 TAAR1Q96RJ0 339 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 GLIS2Q9BZE0 524 aaPredicted RBP14.6□□□□□ -0.07
COL6A3-207ENST00000433762 VEZTQ9HBM0 779 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 C1orf112Q9NSG2 853 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 ZBED4O75132 1171 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 STAM2O75886 525 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 CCNE2O96020 404 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 CCND2P30279 289 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 MAPK4P31152 587 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms