RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 OSGEPQ9NPF4 335 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 FAM189A1O60320 539 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.96
VRK2-205ENST00000432057 MAPK6Q16659 721 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 CST9Q5W186 159 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 PLEKHH3Q7Z736 793 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 PPTC7Q8NI37 304 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 ANKRD62A6NC57 917 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 TOM1L1O75674 476 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 KIF4AO95239 1232 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 INSRRP14616 1297 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 GCNT1Q02742 428 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 BRSK2Q8IWQ3 736 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 SLC35G2Q8TBE7 412 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 TCHPQ9BT92 498 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 ARFGAP3Q9NP61 516 aa21.07■□□□□ 0.96
VRK2-205ENST00000432057 ECM2O94769 699 aaPredicted RBP21.06■□□□□ 0.96
VRK2-205ENST00000432057 MMEP08473 750 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 PAFAH1B1P43034 410 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 FMO1Q01740 532 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 TFDP1Q14186 410 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 RPS6KA1Q15418 735 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 ZNF484Q5JVG2 852 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 SPOPLQ6IQ16 392 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 SLFN11Q7Z7L1 901 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 SPATA4Q8NEY3 305 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 OR5B17Q8NGF7 314 aa21.06■□□□□ 0.96
VRK2-205ENST00000432057 EMID1Q96A84 441 aaPredicted RBP21.06■□□□□ 0.96
VRK2-205ENST00000432057 ABLIM1O14639 778 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 KRT5P13647 590 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 CYP11B1P15538 503 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 MAPK4P31152 587 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 PDE6CP51160 858 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 HUNKP57058 714 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 ITIH3Q06033 890 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 ENOSF1Q7L5Y1 443 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 DAAM2Q86T65 1068 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 MMGT1Q8N4V1 131 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 NPLOC4Q8TAT6 608 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 TAF4BQ92750 862 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 ISCUQ9H1K1 167 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 OGFRQ9NZT2 677 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 INO80B-WBP1J3KQ70 363 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 CALCAP01258 141 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 FTLP02792 175 aaPredicted RBP21.05■□□□□ 0.96
VRK2-205ENST00000432057 CFAP221Q4G0U5 840 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 WDR44Q5JSH3 913 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 LMBR1Q8WVP7 490 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 INO80BQ9C086 356 aaPredicted RBP21.05■□□□□ 0.96
VRK2-205ENST00000432057 CPA4Q9UI42 421 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
VRK2-205ENST00000432057 STXBP5LQ9Y2K9 1186 aa21.05■□□□□ 0.96
VRK2-205ENST00000432057 OGTO15294 1046 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 B4GALT5O43286 388 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 BUB1BO60566 1050 aaPredicted RBP21.04■□□□□ 0.96
VRK2-205ENST00000432057 RTN2O75298 545 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 TBC1D8O95759 1140 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 SMPD1P17405 629 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 MBTD1Q05BQ5 628 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 MCL1Q07820 350 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 LONRF2Q1L5Z9 754 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 PEX26Q7Z412 305 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 TINF2Q9BSI4 451 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 MINDY3Q9H8M7 445 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 COG5Q9UP83 839 aa21.04■□□□□ 0.96
VRK2-205ENST00000432057 KCNK3O14649 394 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 PTENP60484 403 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 CBX1P83916 185 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 CDR2Q01850 454 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 WDR93Q6P2C0 686 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 SYCE1Q8N0S2 351 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 FAM81BQ96LP2 452 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 PPP1R16BQ96T49 567 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 C16orf70Q9BSU1 422 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 FZD8Q9H461 694 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 APOBEC3GQ9HC16 384 aaKnown RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 ABCB6Q9NP58 842 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 RBM12Q9NTZ6 932 aaKnown RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 FAM53CQ9NYF3 392 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 RNF14Q9UBS8 474 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 TARSL2A2RTX5 802 aaKnown RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 SLC15A5A6NIM6 579 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 ACKR2O00590 384 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 SASH3O75995 380 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 PROZP22891 400 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 ACVR2BQ13705 512 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 ATF7IP2Q5U623 682 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 EEF1DP3Q658K8 133 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 SCARA3Q6AZY7 606 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 MPZL3Q6UWV2 235 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 TSHZ1Q6ZSZ6 1077 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 NT5DC3Q86UY8 548 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 CDR2LQ86X02 465 aaPredicted RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 RASAL3Q86YV0 1011 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 LINC01465Q8N7H1 131 aa21.03■□□□□ 0.96
VRK2-205ENST00000432057 HNRNPLLQ8WVV9 542 aaKnown RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 DDX1Q92499 740 aaKnown RBP21.03■□□□□ 0.96
VRK2-205ENST00000432057 COL1A2P08123 1366 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms