RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 LRRC69Q6ZNQ3 347 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 SIAH1Q8IUQ4 282 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 NSUN7Q8NE18 718 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TSPAN18Q96SJ8 248 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 PLIN2Q99541 437 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 BHMT2Q9H2M3 363 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 DDX19AQ9NUU7 478 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ABI2Q9NYB9 513 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 AKAP7Q9P0M2 348 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 DDX49Q9Y6V7 483 aaKnown RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CLUHO75153 1309 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 MSH4O15457 936 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 GPR37L1O60883 481 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 MAFO75444 373 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IGHDP01880 384 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 MUTP22033 750 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 AVPR2P30518 371 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 IRS1P35568 1242 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TPGS2Q68CL5 300 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 FERMT3Q86UX7 667 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TTC39CQ8N584 583 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CPB2Q96IY4 423 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TNIP3Q96KP6 325 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 HERC2P3Q9BVR0 1158 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 MMRN2Q9H8L6 949 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 TBC1D13Q9NVG8 400 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 RMND1Q9NWS8 449 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 DACH1Q9UI36 760 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 ASB3Q9Y575 518 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 SNX14Q9Y5W7 946 aa4.98□□□□□ -1.61
UBE4A-202ENST00000431736 CAPN9O14815 690 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 ZW10O43264 779 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 FGRP09769 529 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 MBL2P11226 248 aaPredicted RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 KCNA2P16389 499 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CXCL12P48061 93 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 PUM1Q14671 1186 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SMAD2Q15796 467 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 Q4G0T1 1027 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SND1Q7KZF4 910 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SPPL3Q8TCT6 385 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 IPO9Q96P70 1041 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SUSD2Q9UGT4 822 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 FAM170BA6NMN3 283 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 H0Y858 1186 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 PODXLO00592 558 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SYN3O14994 580 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 BRD1O95696 1058 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CFIP05156 583 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CSH1P0DML2 217 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CSH2P0DML3 217 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 PDIA3P30101 505 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CYP27A1Q02318 531 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 NECAB1Q8N987 351 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 LARP6Q9BRS8 491 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SYNDIG1Q9H7V2 258 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 DOLKQ9UPQ8 538 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 MYH1P12882 1939 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CNTNAP5Q8WYK1 1306 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 GSTTP1A0A1W2PQM5 241 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 TDP2O95551 362 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 ADH1CP00326 375 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 PRR29P0C7W0 189 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 MCF2P10911 925 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CD19P15391 556 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 IRX5P78411 483 aaPredicted RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 RBP5P82980 135 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 PLCB3Q01970 1234 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SPIRE1Q08AE8 756 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 FAM26DQ5JW98 314 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 FAM228AQ86W67 206 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 ADSSL1Q8N142 457 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 ZNF557Q8N988 423 aaPredicted RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 IGDCC4Q8TDY8 1250 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 C16orf70Q9BSU1 422 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 LRRC4Q9HBW1 653 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 THSD7BQ9C0I4 1608 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 DGKIO75912 1065 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SYPP08247 313 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 TPM1P09493 284 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 EPB41P11171 864 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CLCN5P51795 746 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 DGKEP52429 567 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 C21orf59P57076 290 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 USP4Q13107 963 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SEC23AQ15436 765 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CYP2U1Q7Z449 544 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 KIAA0319LQ8IZA0 1049 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 IQUBQ8NA54 791 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 TRIM62Q9BVG3 475 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 LSG1Q9H089 658 aaKnown RBP4.97□□□□□ -1.61
UBE4A-202ENST00000431736 ERVK-5Q9HDB9 667 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 CDH7Q9ULB5 785 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 SLC26A4O43511 780 aa4.97□□□□□ -1.61
UBE4A-202ENST00000431736 TBC1D4O60343 1298 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms