RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 UNC45AQ9H3U1 944 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
DDX39B-208ENST00000428098 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
DDX39B-208ENST00000428098 TICRRQ7Z2Z1 1910 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 NCANO14594 1321 aa13.32□□□□□ -0.28
DDX39B-208ENST00000428098 ASXL3Q9C0F0 2248 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 MSH4O15457 936 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 PRC1O43663 620 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-208ENST00000428098 EXTL3O43909 919 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 PSMC3P17980 439 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 AKAP5P24588 427 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 OR1D2P34982 312 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 CCR2P41597 374 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 PRSS36Q5K4E3 855 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 KIAA1211LQ6NV74 962 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
DDX39B-208ENST00000428098 ASB16Q96NS5 453 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 KLK14Q9P0G3 267 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 COL4A3BPQ9Y5P4 624 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 CNTNAP5Q8WYK1 1306 aa13.31□□□□□ -0.28
DDX39B-208ENST00000428098 CCDC69A6NI79 296 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 RPP40O75818 363 aaKnown RBP13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CALM1P0DP23 149 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CALM2P0DP24 149 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CALM3P0DP25 149 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CEACAM1P13688 526 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 PTPN2P17706 415 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CIITAP33076 1130 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 NPEPPSP55786 919 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 SETQ01105 290 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-208ENST00000428098 HSP90AA2PQ14568 343 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-208ENST00000428098 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 ANO5Q75V66 913 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CPB2Q96IY4 423 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 ZC3H10Q96K80 434 aaKnown RBP13.3□□□□□ -0.28
DDX39B-208ENST00000428098 EDEM2Q9BV94 578 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 KLK13Q9UKR3 277 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 PCDHGA5Q9Y5G8 931 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 TDRD15B5MCY1 1934 aaKnown RBP13.3□□□□□ -0.28
DDX39B-208ENST00000428098 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
DDX39B-208ENST00000428098 PCNX2A6NKB5 2137 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 MOSPD3O75425 235 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 LIFRP42702 1097 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 MLLT6P55198 1093 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-208ENST00000428098 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-208ENST00000428098 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 TMEM143Q96AN5 459 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 RSPRY1Q96DX4 576 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 MTA3Q9BTC8 594 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 CXCL16Q9H2A7 254 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
DDX39B-208ENST00000428098 POLR3BQ9NW08 1133 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-208ENST00000428098 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
DDX39B-208ENST00000428098 SF3B1O75533 1304 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■□□□□ 11.3
DDX39B-208ENST00000428098 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 CDX4O14627 284 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-208ENST00000428098 ZNF263O14978 683 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 TSPAN1O60635 241 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 KIF4AO95239 1232 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
DDX39B-208ENST00000428098 SFNP31947 248 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 LRRC32Q14392 662 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 PLK5Q496M5 336 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 RIT2Q99578 217 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
DDX39B-208ENST00000428098 DUSP15Q9H1R2 295 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-208ENST00000428098 ASCC3Q8N3C0 2202 aaKnown RBP13.27□□□□□ -0.28
DDX39B-208ENST00000428098 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 GAS7O60861 476 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 PSMD10O75832 226 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 JAK3P52333 1124 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 CCINQ13939 588 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.29
DDX39B-208ENST00000428098 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms