RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 TLE6Q9H808 572 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 MAFFQ9ULX9 164 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 TBX20Q9UMR3 447 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 DERAQ9Y315 318 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 SPTBN5Q9NRC6 3674 aaKnown RBP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CITO14578 2027 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 REV3LO60673 3130 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 A0A087WWV3 80 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 A0A0B4J269 797 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 PVALEFA0A1B0GWK0 134 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 PTGESO14684 152 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 TRAPPC3O43617 180 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 RECQL4O94761 1208 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 MARCKSP29966 332 aaPredicted RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 ERVFC1P60507 584 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 KRT85P78386 507 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 NUCB2P80303 420 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 DSG1Q02413 1049 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 MCM6Q14566 821 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 CCDC85BQ15834 202 aaPredicted RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 ZNF568Q3ZCX4 644 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 ADALQ6DHV7 355 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 DCLRE1AQ6PJP8 1040 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 C15orf39Q6ZRI6 1047 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 MAEAQ7L5Y9 396 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 ZNF280BQ86YH2 543 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 VPS52Q8N1B4 723 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 CMASQ8NFW8 434 aaPredicted RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 GADD45GIP1Q8TAE8 222 aaPredicted RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 LRRC15Q8TF66 581 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 SUSD6Q92537 303 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 DDX12PQ92771 950 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 ACAP3Q96P50 834 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 EMILIN2Q9BXX0 1053 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 CDT1Q9H211 546 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 ASB7Q9H672 318 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 TMEM206Q9H813 350 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 MARCH5Q9NX47 278 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
SMC1A-203ENST00000428014 ADAM28Q9UKQ2 775 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 EXOC7Q9UPT5 735 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 VCANP13611 3396 aa10□□□□□ -0.81
SMC1A-203ENST00000428014 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.81
SMC1A-203ENST00000428014 A0A1W2PQ27 194 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 A0A1W2PQ64 194 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 A0A1W2PQD8 194 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 OGTO15294 1046 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 EIF3DO15371 548 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMC1A-203ENST00000428014 SLC16A4O15374 487 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 FAM189A1O60320 539 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 EDN1P05305 212 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 SSBP05455 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMC1A-203ENST00000428014 ADH1AP07327 375 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CMA1P23946 247 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 IRS1P35568 1242 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 STAT6P42226 847 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 SCNN1GP51170 649 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 EHHADHQ08426 723 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CBX2Q14781 532 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-203ENST00000428014 PTPN14Q15678 1187 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 KIAA0319Q5VV43 1072 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 RESP18Q5W5W9 173 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 USP49Q70CQ1 688 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CCDC65Q8IXS2 484 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 MYCT1Q8N699 235 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 SNX27Q96L92 541 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 C7orf25Q9BPX7 421 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 TARS2Q9BW92 718 aaKnown RBP9.99□□□□□ -0.81
SMC1A-203ENST00000428014 PLEKHA4Q9H4M7 779 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 ENTPD7Q9NQZ7 604 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 MRPL17Q9NRX2 175 aaKnown RBP9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CLDND1Q9NY35 253 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 FAM13BQ9NYF5 915 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CLEC1BQ9P126 229 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 DNAJB4Q9UDY4 337 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 PARP2Q9UGN5 583 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 CD207Q9UJ71 328 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 INPP5FQ9Y2H2 1132 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 C2CD2Q9Y426 696 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 XIRP2A4UGR9 3374 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 UBE4BO95155 1302 aa9.99□□□□□ -0.81
SMC1A-203ENST00000428014 SMIM28A0A1B0GU29 152 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 TTC26A0AVF1 554 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 ARHGEF37A1IGU5 675 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 HNRNPDLO14979 420 aaKnown RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 SYN3O14994 580 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 MBTPS2O43462 519 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 TBX10O75333 385 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 GLP2RO95838 553 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 LDHAP00338 332 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms