RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 DHX8Q14562 1220 aaKnown RBP20.19■□□□□ 0.82
PSPC1-202ENST00000427943 CEP57Q86XR8 500 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 KCTD17Q8N5Z5 321 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 CALML4Q96GE6 196 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 PPP1R10Q96QC0 940 aaKnown RBP20.19■□□□□ 0.82
PSPC1-202ENST00000427943 PTPRHQ9HD43 1115 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 ABLIM1O14639 778 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 BMP15O95972 392 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 PLCG1P19174 1290 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 PDCP20941 246 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
PSPC1-202ENST00000427943 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
PSPC1-202ENST00000427943 STRN3Q13033 797 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 KARSQ15046 597 aaKnown RBP20.18■□□□□ 0.82
PSPC1-202ENST00000427943 ARSHQ5FYA8 562 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 FAM171A1Q5VUB5 890 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 TMEM161BQ8NDZ6 487 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 SPIRE2Q8WWL2 714 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 ZBTB45Q96K62 511 aaPredicted RBP20.18■□□□□ 0.82
PSPC1-202ENST00000427943 TCHPQ9BT92 498 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
PSPC1-202ENST00000427943 ANKFY1Q9P2R3 1169 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 DOCK8Q8NF50 2099 aa20.18■□□□□ 0.82
PSPC1-202ENST00000427943 TGM5O43548 720 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 RFPL2O75678 378 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 MCF2P10911 925 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 PROZP22891 400 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
PSPC1-202ENST00000427943 PLA2G5P39877 138 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 CLCNKBP51801 687 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 RESTQ13127 1097 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 FAM173BQ6P4H8 233 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 MPZL3Q6UWV2 235 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 C15orf39Q6ZRI6 1047 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 SNX27Q96L92 541 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 REEP2Q9BRK0 252 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
PSPC1-202ENST00000427943 TTPALQ9BTX7 342 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 TOPORSQ9NS56 1045 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-202ENST00000427943 BLOC1S4Q9NUP1 217 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 KCND2Q9NZV8 630 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 FNIP2Q9P278 1114 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 CLIC4Q9Y696 253 aa20.17■□□□□ 0.82
PSPC1-202ENST00000427943 SMIM28A0A1B0GU29 152 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 CCDC195A0A1B0GUA6 201 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SLC26A4O43511 780 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 ASGR2P07307 311 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 MAPTP10636 758 aaKnown RBP20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SYT1P21579 422 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SMTNP53814 917 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 CREMQ03060 361 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SOX4Q06945 474 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SIGLEC14Q08ET2 396 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 MCM6Q14566 821 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 PSMD5Q16401 504 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SEZ6Q53EL9 994 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 ELMSAN1Q6PJG2 1045 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 KREMEN2Q8NCW0 462 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 FAM122AQ96E09 287 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 SMOC2Q9H3U7 446 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 ANK1P16157 1881 aa20.16■□□□□ 0.82
PSPC1-202ENST00000427943 B3GAT3O94766 335 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 NCKAP1LP55160 1127 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 ELAVL2Q12926 359 aaKnown RBP20.15■□□□□ 0.82
PSPC1-202ENST00000427943 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
PSPC1-202ENST00000427943 SPECC1Q5M775 1068 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 GPR65Q8IYL9 337 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 C3orf58Q8NDZ4 430 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 CMASQ8NFW8 434 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-202ENST00000427943 PIK3R5Q8WYR1 880 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 RAD54LQ92698 747 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 PBXIP1Q96AQ6 731 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 ZMAT2Q96NC0 199 aaKnown RBP20.15■□□□□ 0.82
PSPC1-202ENST00000427943 LARSQ9P2J5 1176 aaKnown RBP20.15■□□□□ 0.82
PSPC1-202ENST00000427943 DPP7Q9UHL4 492 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 ODF2LQ9ULJ1 636 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 SORCS3Q9UPU3 1222 aa20.15■□□□□ 0.82
PSPC1-202ENST00000427943 MUC6Q6W4X9 2439 aa20.14■□□□□ 0.82
PSPC1-202ENST00000427943 TMEM189-UBE2V1I3L0A0 370 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 I3L4J1 428 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 K7ELQ4 463 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 MEFVO15553 781 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 TOM1L1O75674 476 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 BRD1O95696 1058 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 MARCKSP29966 332 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 MATR3P43243 847 aaKnown RBP eCLIP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 CEBPZQ03701 1054 aaKnown RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 PTPAQ15257 358 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 XKR4Q5GH76 650 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 LILRA6Q6PI73 481 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 ALKAL1Q6UXT8 129 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 USP49Q70CQ1 688 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 ZDHHC14Q8IZN3 488 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 LNX1Q8TBB1 728 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 SMG7Q92540 1137 aaKnown RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 ASIC4Q96FT7 647 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms