RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 REEP2Q9BRK0 252 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 ZHX3Q9H4I2 956 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 RXFP1Q9HBX9 757 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 PTPRHQ9HD43 1115 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.2■□□□□ 0.82
GPC1-205ENST00000427506 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 DPP7Q9UHL4 492 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 RAPGEFL1Q9UHV5 662 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 PRR33A8MZF0 331 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 STX6O43752 255 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 GLUD1P00367 558 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 MYBP10242 640 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
GPC1-205ENST00000427506 CREMQ03060 361 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 PTPAQ15257 358 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 NAB2Q15742 525 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 FAM171A1Q5VUB5 890 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 PALB2Q86YC2 1186 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 GLYCTKQ8IVS8 523 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 MYCT1Q8N699 235 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 BICD1Q96G01 975 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 ZBTB45Q96K62 511 aaPredicted RBP20.19■□□□□ 0.82
GPC1-205ENST00000427506 ACAP3Q96P50 834 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 CCSER1Q9C0I3 900 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 ZSCAN16Q9H4T2 348 aaPredicted RBP20.19■□□□□ 0.82
GPC1-205ENST00000427506 MAN1C1Q9NR34 630 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 CCDC39Q9UFE4 941 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
GPC1-205ENST00000427506 TOM1L1O75674 476 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 PROZP22891 400 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 TXLNAP40222 546 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 HAUS6Q7Z4H7 955 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 LRRC15Q8TF66 581 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 LARP4BQ92615 738 aaKnown RBP20.18■□□□□ 0.82
GPC1-205ENST00000427506 EPSTI1Q96J88 318 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 PPP1R10Q96QC0 940 aaKnown RBP20.18■□□□□ 0.82
GPC1-205ENST00000427506 TTPALQ9BTX7 342 aa20.18■□□□□ 0.82
GPC1-205ENST00000427506 FBXO2Q9UK22 296 aaPredicted RBP20.18■□□□□ 0.82
GPC1-205ENST00000427506 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
GPC1-205ENST00000427506 SMIM28A0A1B0GU29 152 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 TBCAO75347 108 aaKnown RBP20.17■□□□□ 0.82
GPC1-205ENST00000427506 B3GAT3O94766 335 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 HSP90AA1P07900 732 aaKnown RBP20.17■□□□□ 0.82
GPC1-205ENST00000427506 SPATA31D3P0C874 917 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 RPL17P18621 184 aaKnown RBP20.17■□□□□ 0.82
GPC1-205ENST00000427506 DDIT3P35638 169 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 NCKAP1LP55160 1127 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 ELAVL2Q12926 359 aaKnown RBP20.17■□□□□ 0.82
GPC1-205ENST00000427506 NOLC1Q14978 699 aaKnown RBP eCLIP20.17■□□□□ 0.82
GPC1-205ENST00000427506 PRSS55Q6UWB4 352 aaPredicted RBP20.17■□□□□ 0.82
GPC1-205ENST00000427506 ZPBP2Q6X784 338 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 SPATA31D4Q6ZUB0 917 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 GPR149Q86SP6 731 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 GPR65Q8IYL9 337 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 EDAQ92838 391 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 SNX21Q969T3 373 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 UROC1Q96N76 676 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 PARVGQ9HBI0 331 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 SLC38A7Q9NVC3 462 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 FNIP2Q9P278 1114 aa20.17■□□□□ 0.82
GPC1-205ENST00000427506 K7ENM7 598 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 ABLIM1O14639 778 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 CLDN3O15551 220 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 BRD1O95696 1058 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 CLCNKBP51801 687 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 RTP2Q5QGT7 225 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 SNX27Q96L92 541 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 CLIC6Q96NY7 704 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 HCN4Q9Y3Q4 1203 aa20.16■□□□□ 0.82
GPC1-205ENST00000427506 CCDC195A0A1B0GUA6 201 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 C2CD4DB7Z1M9 353 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 TRAK2O60296 914 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 LIG4P49917 911 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 SEZ6Q53EL9 994 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 XKR4Q5GH76 650 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 ALKAL1Q6UXT8 129 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 C15orf39Q6ZRI6 1047 aa20.15■□□□□ 0.82
GPC1-205ENST00000427506 KRI1Q8N9T8 703 aaKnown RBP20.15■□□□□ 0.82
GPC1-205ENST00000427506 TDRD5Q8NAT2 981 aaKnown RBP20.15■□□□□ 0.82
GPC1-205ENST00000427506 TMEM189-UBE2V1I3L0A0 370 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 TGM5O43548 720 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 TRAPPC3O43617 180 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 SCP2P22307 547 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 ZNF131P52739 623 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 ZXDAP98168 799 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 MCL1Q07820 350 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 PSMD5Q16401 504 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 UPP1Q16831 310 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 PDXDC1Q6P996 788 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 CCDC149Q6ZUS6 474 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 FEZF2Q8TBJ5 459 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 HDAC7Q8WUI4 952 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms