RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 TEX9Q8N6V9 391 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 ARL10Q8N8L6 244 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 PPFIBP2Q8ND30 876 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 KCNMB3Q9NPA1 279 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
PKP4-205ENST00000426248 CPA4Q9UI42 421 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 COL4A5P29400 1685 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 CYP11B2P19099 503 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 GTF2A2P52657 109 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 LACTB2Q53H82 288 aaPredicted RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 RUBCNQ92622 972 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 INTUQ9ULD6 942 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 EEF1GP26641 437 aaKnown RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 YWHABP31946 246 aaKnown RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 PLTPP55058 493 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 PSMC5P62195 406 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 RBM41Q96IZ5 413 aaKnown RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 PLCB1Q9NQ66 1216 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 TXNP10599 105 aaKnown RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 DESP17661 470 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
PKP4-205ENST00000426248 PPIL2Q13356 520 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 ECM1Q16610 540 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 PCNX4Q63HM2 1172 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 DEPTORQ8TB45 409 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 MTRQ99707 1265 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 VCX3BQ9H321 246 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 VCX3AQ9NNX9 186 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 CYP39A1Q9NYL5 469 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
PKP4-205ENST00000426248 PLA2G6O60733 806 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 ATP9AO75110 1047 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 ABCD1P33897 745 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 SNRNP27Q8WVK2 155 aaKnown RBP17.03■□□□□ 0.32
PKP4-205ENST00000426248 DNAJC9Q8WXX5 260 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 RUSC1Q9BVN2 902 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 FAM114A2Q9NRY5 505 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 NRBP2Q9NSY0 501 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 TCP11X1B4DZS4 312 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 ATP6V1G1O75348 118 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
PKP4-205ENST00000426248 PDE6CP51160 858 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 ZNF131P52739 623 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 COPS2P61201 443 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
PKP4-205ENST00000426248 STRN3Q13033 797 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 LLGL1Q15334 1064 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 RAB17Q9H0T7 212 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 TUFT1Q9NNX1 390 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 LRRC53A6NM62 1247 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 SLC25A27O95847 323 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 TMED1Q13445 227 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
PKP4-205ENST00000426248 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
PKP4-205ENST00000426248 ANKRD62A6NC57 917 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 SLC16A4O15374 487 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 MYH6P13533 1939 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 SLC9C1Q4G0N8 1177 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 FAM129AQ9BZQ8 928 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 NDST4Q9H3R1 872 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 SFNP31947 248 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 SLC5A9Q2M3M2 681 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 ZC2HC1CQ53FD0 456 aaPredicted RBP17.02■□□□□ 0.32
PKP4-205ENST00000426248 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 LRIG3Q6UXM1 1119 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 FMO2Q99518 471 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.32
PKP4-205ENST00000426248 KMT5AQ9NQR1 393 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 ZNF112Q9UJU3 913 aa17.02■□□□□ 0.32
PKP4-205ENST00000426248 PFASO15067 1338 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 ZNF536O15090 1300 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 GAP43P17677 238 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 CIITAP33076 1130 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 GALNT15Q8N3T1 639 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 SPATA33Q96N06 139 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 ZNF214Q9UL59 606 aaPredicted RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 GSTA1P08263 222 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 CUL1Q13616 776 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 FBXO16Q8IX29 292 aaPredicted RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 CTNNBL1Q8WYA6 563 aaPredicted RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 CELF4Q9BZC1 486 aaKnown RBP17.02■□□□□ 0.31
PKP4-205ENST00000426248 ZNF302Q9NR11 478 aa17.02■□□□□ 0.31
PKP4-205ENST00000426248 MAST2Q6P0Q8 1798 aa17.01■□□□□ 0.31
PKP4-205ENST00000426248 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
PKP4-205ENST00000426248 SART1O43290 800 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms