RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ME1P48163 572 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 NOLC1Q14978 699 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNX3-204ENST00000426155 PTPN14Q15678 1187 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 ZBTB41Q5SVQ8 909 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 PDE12Q6L8Q7 609 aaKnown RBP14.92□□□□□ -0.02
SNX3-204ENST00000426155 SLC39A4Q6P5W5 647 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 KCNG4Q8TDN1 519 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 DHX58Q96C10 678 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 MSLNLQ96KJ4 702 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 APOL5Q9BWW9 433 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 FGFBP2Q9BYJ0 223 aa14.92□□□□□ -0.02
SNX3-204ENST00000426155 C2orf16Q68DN1 1984 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 GRXCR2A6NFK2 248 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 HNRNPDLO14979 420 aaKnown RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 NCK2O43639 380 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 CLASP2O75122 1294 aaKnown RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 EFEMP2O95967 443 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 SOD2P04179 222 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 THP07101 528 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 IDEP14735 1019 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 TNFSF9P41273 254 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 MATR3P43243 847 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX3-204ENST00000426155 CASP5P51878 434 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 SOX4Q06945 474 aaPredicted RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 KCNC3Q14003 757 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 HSP90AA2PQ14568 343 aaPredicted RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 FUT10Q6P4F1 479 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 ZPBP2Q6X784 338 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 APBB1IPQ7Z5R6 666 aaPredicted RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 RNF168Q8IYW5 571 aaPredicted RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 SNX27Q96L92 541 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 ZMAT2Q96NC0 199 aaKnown RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 PPP1R10Q96QC0 940 aaKnown RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 HERC2P3Q9BVR0 1158 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
SNX3-204ENST00000426155 GPR62Q9BZJ7 368 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 CDH22Q9UJ99 828 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 HCFC2Q9Y5Z7 792 aa14.91□□□□□ -0.02
SNX3-204ENST00000426155 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 H0YCG3 227 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 MBTPS2O43462 519 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CXCL8P10145 99 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 EPCAMP16422 314 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CASP1P29466 404 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 LIG4P49917 911 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 YARSP54577 528 aaKnown RBP14.9□□□□□ -0.02
SNX3-204ENST00000426155 GTF2BQ00403 316 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 MCL1Q07820 350 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 KCNA1Q09470 495 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 BECN1Q14457 450 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 TPRNQ4KMQ1 711 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 MAP4K3Q8IVH8 894 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 KCNN1Q92952 543 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 HPS3Q969F9 1004 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CDCA3Q99618 268 aaPredicted RBP14.9□□□□□ -0.02
SNX3-204ENST00000426155 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CD320Q9NPF0 282 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CD207Q9UJ71 328 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 RCOR1Q9UKL0 485 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 ADAM28Q9UKQ2 775 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 CFAP45Q9UL16 551 aa14.9□□□□□ -0.02
SNX3-204ENST00000426155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 CARNS1A5YM72 827 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 ANKRD63C9JTQ0 380 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 POLR2DO15514 142 aaKnown RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 CLDN3O15551 220 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 FAM189A1O60320 539 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 NR1I2O75469 434 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 PIGRP01833 764 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 MYBP10242 640 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 GLUD2P49448 558 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 CLCNKBP51801 687 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 SPAG1Q07617 926 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 SMAD4Q13485 552 aaKnown RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 RESP18Q5W5W9 173 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 ATL3Q6DD88 541 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 KANK3Q6NY19 840 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 ALKAL1Q6UXT8 129 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 SMRP1Q8NCR6 262 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 C3orf58Q8NDZ4 430 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 GLIS3Q8NEA6 775 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 LEO1Q8WVC0 666 aaPredicted RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 C18orf25Q96B23 403 aaPredicted RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 ACAP3Q96P50 834 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 MRPL44Q9H9J2 332 aaKnown RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 TOPORSQ9NS56 1045 aaPredicted RBP14.89□□□□□ -0.03
SNX3-204ENST00000426155 IRAK3Q9Y616 596 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
SNX3-204ENST00000426155 MTCL1Q9Y4B5 1905 aaKnown RBP14.88□□□□□ -0.03
SNX3-204ENST00000426155 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 LILRB3O75022 631 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 TADA2AO75478 443 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 PPP1R37O75864 691 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 URODP06132 367 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 CNPP09543 421 aaKnown RBP14.88□□□□□ -0.03
SNX3-204ENST00000426155 KRT85P78386 507 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 COASYQ13057 564 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 SLC10A6Q3KNW5 377 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms