RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 FAM207AQ9NSI2 230 aaPredicted RBP17.1■□□□□ 0.33
SCRN1-205ENST00000425819 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
SCRN1-205ENST00000425819 IPPQ9Y573 584 aa17.1■□□□□ 0.33
SCRN1-205ENST00000425819 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCRN1-205ENST00000425819 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 NBNO60934 754 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 IL18RAPO95256 599 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 CLTBP09497 229 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 SLC9A1P19634 815 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 AKAP5P24588 427 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 GTF2H1P32780 548 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 CCL23P55773 120 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 CLDN10P78369 228 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 APBA1Q02410 837 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 TBX2Q13207 712 aaPredicted RBP17.09■□□□□ 0.33
SCRN1-205ENST00000425819 DSC3Q14574 896 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 SURF1Q15526 300 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 KRT39Q6A163 491 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
SCRN1-205ENST00000425819 SCLYQ96I15 445 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 FAM105AQ9NUU6 356 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 IMPACTQ9P2X3 320 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
SCRN1-205ENST00000425819 GTPBP10A4D1E9 387 aaKnown RBP17.08■□□□□ 0.32
SCRN1-205ENST00000425819 RECQL4O94761 1208 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 ACTN1P12814 892 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 TRIM21P19474 475 aaKnown RBP17.08■□□□□ 0.32
SCRN1-205ENST00000425819 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
SCRN1-205ENST00000425819 PON1P27169 355 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 CYP2C18P33260 490 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
SCRN1-205ENST00000425819 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 CETN1Q12798 172 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 GPNMBQ14956 572 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 WDR49Q8IV35 697 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 OR5B17Q8NGF7 314 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 ADAM2Q99965 735 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 TBX21Q9UL17 535 aa17.08■□□□□ 0.32
SCRN1-205ENST00000425819 KIAA0100Q14667 2235 aaKnown RBP17.08■□□□□ 0.32
SCRN1-205ENST00000425819 TTC26A0AVF1 554 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 EPHB6O15197 1021 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 P4HA2O15460 535 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 GYPCP04921 128 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 NFICP08651 508 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
SCRN1-205ENST00000425819 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
SCRN1-205ENST00000425819 BIRC3Q13489 604 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 ARID5BQ14865 1188 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
SCRN1-205ENST00000425819 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 EFCAB13Q8IY85 973 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 SNX27Q96L92 541 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
SCRN1-205ENST00000425819 CXCL16Q9H2A7 254 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 KLK14Q9P0G3 267 aa17.07■□□□□ 0.32
SCRN1-205ENST00000425819 LRRN2O75325 713 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 C4BPAP04003 597 aaKnown RBP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 CASP14P31944 242 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 TRIM14Q14142 442 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 ZACNQ401N2 412 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 EPC2Q52LR7 807 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 TRIM65Q6PJ69 517 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 TAS1R2Q8TE23 839 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 NUP58Q9BVL2 599 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 ASB7Q9H672 318 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 PMM2O15305 246 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 PHACTR2O75167 634 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 TPM1P09493 284 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 TMEM191BP0C7N4 346 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 AP3M2P53677 418 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
SCRN1-205ENST00000425819 DUOXA2Q1HG44 320 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 UBE2Q1Q7Z7E8 422 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 FBXL13Q8NEE6 735 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 DBF4BQ8NFT6 615 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 LPPQ93052 612 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 KIF12Q96FN5 646 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 PLEKHA5Q9HAU0 1116 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
SCRN1-205ENST00000425819 DNAH12Q6ZR08 3092 aa17.05■□□□□ 0.32
SCRN1-205ENST00000425819 MEIS3P2A8K0S8 358 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms