RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SUSD6Q92537 303 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 DDX12PQ92771 950 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 UROC1Q96N76 676 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 S1PR5Q9H228 398 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 CXCL16Q9H2A7 254 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 RXFP1Q9HBX9 757 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 SLC38A7Q9NVC3 462 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 DZANK1Q9NVP4 752 aa20.21■□□□□ 0.83
MSH5-207ENST00000425703 SF3B1O75533 1304 aaKnown RBP eCLIP20.21■□□□□ 0.833e-8■■■■□ 26.7
MSH5-207ENST00000425703 SMIM28A0A1B0GU29 152 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 CASTOR2A6NHX0 329 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 C19orf67A6NJJ6 358 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 F8W810 466 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 TADA2AO75478 443 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 CNPP09543 421 aaKnown RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 KCNE1P15382 129 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 GAP43P17677 238 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 ELAVL2Q12926 359 aaKnown RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 PKP1Q13835 747 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 FOXD4L5Q5VV16 416 aaPredicted RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 KIAA1841Q6NSI8 718 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 LLGL2Q6P1M3 1020 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 SYCE2Q6PIF2 218 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 TAS1R1Q7RTX1 841 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 MAP4K3Q8IVH8 894 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 SLC22A17Q8WUG5 538 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 FOXD4L4Q8WXT5 416 aaPredicted RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 BICD1Q96G01 975 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 ZBTB45Q96K62 511 aaPredicted RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 SNX27Q96L92 541 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 KLHL5Q96PQ7 755 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 GPR62Q9BZJ7 368 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 CUEDC2Q9H467 287 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 ZHX3Q9H4I2 956 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.2■□□□□ 0.82
MSH5-207ENST00000425703 CNTN3Q9P232 1028 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
MSH5-207ENST00000425703 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
MSH5-207ENST00000425703 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
MSH5-207ENST00000425703 A0A087X0B3 334 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 MYMKA6NI61 221 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 TMEM189-UBE2V1I3L0A0 370 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 HNRNPDLO14979 420 aaKnown RBP20.19■□□□□ 0.82
MSH5-207ENST00000425703 LIG4P49917 911 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 CREMQ03060 361 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 ITIH3Q06033 890 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 DNAJC19Q96DA6 116 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 PAAF1Q9BRP4 392 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 LRRC27Q9C0I9 530 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 PLEKHA5Q9HAU0 1116 aa20.19■□□□□ 0.82
MSH5-207ENST00000425703 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.19■□□□□ 0.82
MSH5-207ENST00000425703 KIF4AO95239 1232 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 ADH1AP07327 375 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 CLTAP09496 248 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 KLRC2P26717 231 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 CLCN4P51793 760 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 OSTNP61366 133 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 E2F4Q16254 413 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 GLRA4Q5JXX5 417 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
MSH5-207ENST00000425703 DCLRE1AQ6PJP8 1040 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 DYMQ7RTS9 669 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 ZNF720Q7Z2F6 126 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 HVCN1Q96D96 273 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 DDX27Q96GQ7 796 aaKnown RBP20.18■□□□□ 0.82
MSH5-207ENST00000425703 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 ADAM7Q9H2U9 754 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 CD320Q9NPF0 282 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 OLFML3Q9NRN5 406 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 FNIP2Q9P278 1114 aa20.18■□□□□ 0.82
MSH5-207ENST00000425703 MYH11P35749 1972 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 FRMD3A2A2Y4 597 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 HARSP12081 509 aaKnown RBP20.17■□□□□ 0.82
MSH5-207ENST00000425703 NMT1P30419 496 aaKnown RBP20.17■□□□□ 0.82
MSH5-207ENST00000425703 SSTR3P32745 418 aaPredicted RBP20.17■□□□□ 0.82
MSH5-207ENST00000425703 UPP1Q16831 310 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 SHC4Q6S5L8 630 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 SFR1Q86XK3 245 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 RABGGTAQ92696 567 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 TSPAN18Q96SJ8 248 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 HAPLN2Q9GZV7 340 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 TNMDQ9H2S6 317 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 DPP7Q9UHL4 492 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 RCOR1Q9UKL0 485 aa20.17■□□□□ 0.82
MSH5-207ENST00000425703 A0A0B4J269 797 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 C2CD2LO14523 706 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 TEX28O15482 410 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 PPP1R37O75864 691 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 EPCAMP16422 314 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 MATR3P43243 847 aaKnown RBP eCLIP20.16■□□□□ 0.82
MSH5-207ENST00000425703 DNM1Q05193 864 aaKnown RBP20.16■□□□□ 0.82
MSH5-207ENST00000425703 CBX2Q14781 532 aaPredicted RBP20.16■□□□□ 0.82
MSH5-207ENST00000425703 SLC10A6Q3KNW5 377 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 CES5AQ6NT32 575 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 PDXDC1Q6P996 788 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 ELMSAN1Q6PJG2 1045 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 PDILTQ8N807 584 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 IQUBQ8NA54 791 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 ZMAT2Q96NC0 199 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms