RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 ST6GALNAC4Q9H4F1 302 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 PDZD7Q9H5P4 517 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 TRAF3IP3Q9Y228 551 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 UBE4BO95155 1302 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 A0A0U1RQF3 1178 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 PDXKO00764 312 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 PPP1R37O75864 691 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 NPTXRO95502 500 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 RABGGTBP53611 331 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 FAM189BP81408 668 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 PPP2R3AQ06190 1150 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 LRRC55Q6ZSA7 311 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 EPM2AIP1Q7L775 607 aaPredicted RBP16.98■□□□□ 0.31
SHOX2-202ENST00000425436 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 ECHDC2Q86YB7 292 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 TOP1MTQ969P6 601 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 KCTD10Q9H3F6 313 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 NDST4Q9H3R1 872 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 C1orf112Q9NSG2 853 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 ABHD10Q9NUJ1 306 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 FAM105AQ9NUU6 356 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 HES2Q9Y543 173 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 PCDHB2Q9Y5E7 798 aa16.98■□□□□ 0.31
SHOX2-202ENST00000425436 TISP43B9A030 160 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 KRT9P35527 623 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 MIIPQ5JXC2 388 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 LPPQ93052 612 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 EDEM3Q9BZQ6 932 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 ZNHIT6Q9NWK9 470 aaKnown RBP16.97■□□□□ 0.31
SHOX2-202ENST00000425436 LRFN2Q9ULH4 789 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 TNFSF13BQ9Y275 285 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 PCDHB7Q9Y5E2 793 aa16.97■□□□□ 0.31
SHOX2-202ENST00000425436 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 ANKRD63C9JTQ0 380 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 CCDC175P0C221 793 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
SHOX2-202ENST00000425436 TRIM21P19474 475 aaKnown RBP16.96■□□□□ 0.31
SHOX2-202ENST00000425436 HOXD13P35453 343 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 LIG4P49917 911 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 FXR1P51114 621 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHOX2-202ENST00000425436 ADAM9Q13443 819 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 NFIL3Q16649 462 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 PTPN21Q16825 1174 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 MAP4K3Q8IVH8 894 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 CRIPAKQ8N1N5 446 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
SHOX2-202ENST00000425436 PHOSPHO2Q8TCD6 241 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 KCNN1Q92952 543 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 ACCSQ96QU6 501 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 SLC9A7Q96T83 725 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 ZBED2Q9BTP6 218 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 APOL6Q9BWW8 343 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
SHOX2-202ENST00000425436 HAPLN2Q9GZV7 340 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 PTPRHQ9HD43 1115 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 ANKFY1Q9P2R3 1169 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 PPP2R2CQ9Y2T4 447 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 GBF1Q92538 1859 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 TRIOBPQ9H2D6 2365 aa16.96■□□□□ 0.31
SHOX2-202ENST00000425436 USP27XA6NNY8 438 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 HNRNPDLO14979 420 aaKnown RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 FGFR1P11362 822 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 MYOGP15173 224 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 ATF7P17544 494 aaPredicted RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 SCP2P22307 547 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 MATR3P43243 847 aaKnown RBP eCLIP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 GATMP50440 423 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 ZBED6P86452 979 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 ALCAMQ13740 583 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 GOLGA5Q8TBA6 731 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 DNAJC7Q99615 494 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 NXF3Q9H4D5 531 aaKnown RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 METTL14Q9HCE5 456 aaKnown RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 TYW1Q9NV66 732 aaKnown RBP16.96■□□□□ 0.3
SHOX2-202ENST00000425436 IPPQ9Y573 584 aa16.96■□□□□ 0.3
SHOX2-202ENST00000425436 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
SHOX2-202ENST00000425436 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
SHOX2-202ENST00000425436 TOM1L1O75674 476 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 GJB5O95377 273 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 PROZP22891 400 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 ABCD1P33897 745 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 PBX2P40425 430 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 OSTNP61366 133 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 GOLGA8FQ08AF8 430 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 GOLGA8DPQ0D2H9 430 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 SYCP1Q15431 976 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms