RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PNPLA1Q8N8W4 532 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 HASPINQ8TF76 798 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 SMARCD2Q92925 531 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 FAM227BQ96M60 508 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 MBOAT7Q96N66 472 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 FDXACB1Q9BRP7 624 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TRAIPQ9BWF2 469 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 GPR62Q9BZJ7 368 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TRIM6Q9C030 488 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CNNM2Q9H8M5 875 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 LY9Q9HBG7 655 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 TRPV5Q9NQA5 729 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 CHST7Q9NS84 486 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 DDX19BQ9UMR2 479 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 PCDHB15Q9Y5E8 787 aa7.1□□□□□ -1.27
SDCBP-203ENST00000424270 ZMYM6O95789 1325 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 IGKV6D-21A0A0A0MT36 114 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ARL5CA6NH57 179 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 MEFVO15553 781 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF623O75123 536 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ATG7O95352 703 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 PAPLNO95428 1278 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 MYL4P12829 197 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ENGP17813 658 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 FCARP24071 287 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 OR1D2P34982 312 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 NCBP1Q09161 790 aaKnown RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 GRSF1Q12849 480 aaKnown RBP eCLIP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 PSMD2Q13200 908 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 SART3Q15020 963 aaKnown RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 MAPK6Q16659 721 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 IMMTQ16891 758 aaKnown RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 CEP55Q53EZ4 464 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 TAF1BQ53T94 588 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 RTP2Q5QGT7 225 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 IQCEQ6IPM2 695 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 PDXDC1Q6P996 788 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 LRRC69Q6ZNQ3 347 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 CATIPQ7Z7H3 387 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ZSCAN18Q8TBC5 510 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-203ENST00000424270 ASB16Q96NS5 453 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 GAD1Q99259 594 aa7.09□□□□□ -1.27
SDCBP-203ENST00000424270 DMXL2Q8TDJ6 3036 aa7.09□□□□□ -1.28
SDCBP-203ENST00000424270 A0A0D9SFI3 127 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 WDR27A2RRH5 827 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 FAM221BA6H8Z2 402 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 HEPACAM2A8MVW5 462 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 IFIT3O14879 490 aaKnown RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CYTH3O43739 400 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 OPHN1O60890 802 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 ERLIN2O94905 339 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 APBB3O95704 486 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 OATP04181 439 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CAPNS1P04632 268 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 ATP4AP20648 1035 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CTHP32929 405 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 ARPP19P56211 112 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CYP4F3Q08477 520 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 TRDNQ13061 729 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 HNRNPDQ14103 355 aaKnown RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 PTPAQ15257 358 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 TRIP6Q15654 476 aaKnown RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 MTERF2Q49AM1 385 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 TXNDC11Q6PKC3 985 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CCNI2Q6ZMN8 369 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 HEATR3Q7Z4Q2 680 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 PLA2G4DQ86XP0 818 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 MFSD6LQ8IWD5 586 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 RNF168Q8IYW5 571 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 FAM181AQ8N9Y4 354 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CNNM3Q8NE01 707 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CTCFLQ8NI51 663 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 E2F7Q96AV8 911 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 EVI5LQ96CN4 794 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 TCEAL4Q96EI5 215 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 PGBD1Q96JS3 809 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 ZFP42Q96MM3 310 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 FCRL3Q96P31 734 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 CLSTN3Q9BQT9 956 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF577Q9BSK1 485 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 SEPT9Q9UHD8 586 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 APOBEC2Q9Y235 224 aaKnown RBP7.08□□□□□ -1.28
SDCBP-203ENST00000424270 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
SDCBP-203ENST00000424270 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 TENM4Q6N022 2769 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 SMG1Q96Q15 3661 aaKnown RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 MYBPHLA2RUH7 354 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 IPO5O00410 1097 aaKnown RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 CHADO15335 359 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF862O60290 1169 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 POU2F2P09086 479 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 FTH1P19P0C7X4 201 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms