RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 PIK3R5Q8WYR1 880 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 FGF13Q92913 245 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 NXPE3Q969Y0 559 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
PLOD3-204ENST00000424135 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 DPP7Q9UHL4 492 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 NOTCH4Q99466 2003 aa12.98□□□□□ -0.33
PLOD3-204ENST00000424135 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
PLOD3-204ENST00000424135 I3L4J1 428 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 NRG2O14511 850 aaPredicted RBP12.97□□□□□ -0.33
PLOD3-204ENST00000424135 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
PLOD3-204ENST00000424135 NEMFO60524 1076 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 C1RP00736 705 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 XBP1P17861 261 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 LIG1P18858 919 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 ATP2B1P20020 1258 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 STARD6P59095 220 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 GLRA4Q5JXX5 417 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 ELMSAN1Q6PJG2 1045 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 NSUN7Q8NE18 718 aaKnown RBP12.97□□□□□ -0.33
PLOD3-204ENST00000424135 KXD1Q9BQD3 176 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 CCDC113Q9H0I3 377 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
PLOD3-204ENST00000424135 OR1D2P34982 312 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 ECM1Q16610 540 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 FAM187BQ17R55 369 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 NT5DC1Q5TFE4 455 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.33
PLOD3-204ENST00000424135 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 SLC7A14Q8TBB6 771 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
PLOD3-204ENST00000424135 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
PLOD3-204ENST00000424135 PLA2G2FQ9BZM2 168 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
PLOD3-204ENST00000424135 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.33
PLOD3-204ENST00000424135 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
PLOD3-204ENST00000424135 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.34
PLOD3-204ENST00000424135 ZMYM2Q9UBW7 1377 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 PRKCBP05771 671 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 THP07101 528 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 MCM7P33993 719 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 SLC5A9Q2M3M2 681 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 SLC44A4Q53GD3 710 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
PLOD3-204ENST00000424135 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 TMEM130Q8N3G9 435 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 PRIMPOLQ96LW4 560 aa12.95□□□□□ -0.34
PLOD3-204ENST00000424135 KANSL1LA0AUZ9 987 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 ACKR2O00590 384 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 HNRNPA1P09651 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 FGFR3P22607 806 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 TKTP29401 623 aaKnown RBP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 BRCC3P46736 316 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 CLCNKBP51801 687 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 CREMQ03060 361 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 PRPF4BQ13523 1007 aaKnown RBP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 RAB33AQ14088 237 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 MLF2Q15773 248 aaPredicted RBP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 CEP120Q8N960 986 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 PPP1R10Q96QC0 940 aaKnown RBP12.94□□□□□ -0.34
PLOD3-204ENST00000424135 SEMA4AQ9H3S1 761 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 CDY1Q9Y6F8 540 aa12.94□□□□□ -0.34
PLOD3-204ENST00000424135 FANCMQ8IYD8 2048 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 FAM170BA6NMN3 283 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 N4BP3O15049 544 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 CYP11B2P19099 503 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 FZD5Q13467 585 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 UBXN2BQ14CS0 331 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 ZNF174Q15697 407 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 TMEM132AQ24JP5 1023 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 TSSK4Q6SA08 328 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.93□□□□□ -0.34
PLOD3-204ENST00000424135 MCPH1Q8NEM0 835 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 WASF1Q92558 559 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 MCRS1Q96EZ8 462 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
PLOD3-204ENST00000424135 HINFPQ9BQA5 517 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 BRMS1Q9HCU9 246 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
PLOD3-204ENST00000424135 SPATA6Q9NWH7 488 aaPredicted RBP12.93□□□□□ -0.34
PLOD3-204ENST00000424135 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms