RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SEZ6Q53EL9 994 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 ZPBP2Q6X784 338 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 C12orf76Q8N812 135 aaPredicted RBP19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 HASPINQ8TF76 798 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 SNX27Q96L92 541 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 ZMAT2Q96NC0 199 aaKnown RBP19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 GOLGA2P5Q9HBQ8 144 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 RXFP1Q9HBX9 757 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 MRPL17Q9NRX2 175 aaKnown RBP19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
SBDSP1-202ENST00000423945 MYMKA6NI61 221 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 K7ENM7 598 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 SPTLC2O15270 562 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 TRAK2O60296 914 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 HSP90AA1P07900 732 aaKnown RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 SRGAP2BP0DMP2 458 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 HOXB8P17481 243 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 NMT1P30419 496 aaKnown RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 SSTR3P32745 418 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 MCL1Q07820 350 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 STK38Q15208 465 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 FOXD4L6Q3SYB3 417 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 RRAGBQ5VZM2 374 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 FOXD4L3Q6VB84 417 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 APBB1IPQ7Z5R6 666 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 DNAJC19Q96DA6 116 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 ZNF396Q96N95 335 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 TCHPQ9BT92 498 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 CCDC94Q9BW85 323 aaPredicted RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 PANK2Q9BZ23 570 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 ANKFY1Q9P2R3 1169 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 TBX20Q9UMR3 447 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 C2orf16Q68DN1 1984 aa19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 MTCL1Q9Y4B5 1905 aaKnown RBP19.53■□□□□ 0.72
SBDSP1-202ENST00000423945 TEX28O15482 410 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 PPP6R2O75170 966 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 TADA2AO75478 443 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 YEATS4O95619 227 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 PIGRP01833 764 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 RTP2Q5QGT7 225 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 SLC39A4Q6P5W5 647 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 DYMQ7RTS9 669 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 C3orf58Q8NDZ4 430 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 DDX12PQ92771 950 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 ACAP3Q96P50 834 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 EMILIN2Q9BXX0 1053 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 CNTN3Q9P232 1028 aa19.52■□□□□ 0.72
SBDSP1-202ENST00000423945 DENND4AQ7Z401 1863 aa19.52■□□□□ 0.71
SBDSP1-202ENST00000423945 LOC730098B7Z3J9 87 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 PI4K2BG5E9Z4 385 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 H0YCG3 227 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 FAM189A1O60320 539 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 TBCAO75347 108 aaKnown RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 WEE2P0C1S8 567 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 KCNE1P15382 129 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 KLRC2P26717 231 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 TXLNAP40222 546 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 CLCNKBP51801 687 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 YARSP54577 528 aaKnown RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 GTF2BQ00403 316 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 CBX2Q14781 532 aaPredicted RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 SLC10A6Q3KNW5 377 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 USP41Q3LFD5 358 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 ZC2HC1CQ53FD0 456 aaPredicted RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 AXDND1Q5T1B0 1012 aaPredicted RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 PPFIBP1Q86W92 1011 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 SFR1Q86XK3 245 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 PHF7Q9BWX1 381 aaPredicted RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 ADAM7Q9H2U9 754 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 ZHX3Q9H4I2 956 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 TOPORSQ9NS56 1045 aaPredicted RBP19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 TRIOO75962 3097 aa19.51■□□□□ 0.71
SBDSP1-202ENST00000423945 SF3B1O75533 1304 aaKnown RBP eCLIP19.51■□□□□ 0.719e-6■■■■■ 68.9
SBDSP1-202ENST00000423945 TMEM189-UBE2V1I3L0A0 370 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 CLDN3O15551 220 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 PDIA4P13667 645 aaKnown RBP19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 COL9A1P20849 921 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 TNFSF9P41273 254 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 E2F4Q16254 413 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 UPP1Q16831 310 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 TPRNQ4KMQ1 711 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 ZBTB41Q5SVQ8 909 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 RARS2Q5T160 578 aaKnown RBP19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 SHC4Q6S5L8 630 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 PRSS55Q6UWB4 352 aaPredicted RBP19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 SV2BQ7L1I2 683 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 MAP4K3Q8IVH8 894 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 GPR65Q8IYL9 337 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 PDILTQ8N807 584 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 TMEM87AQ8NBN3 555 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 RIN2Q8WYP3 895 aaPredicted RBP19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 FBXL18Q96ME1 805 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 STRA6Q9BX79 667 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 IKZF4Q9H2S9 585 aa19.5■□□□□ 0.71
SBDSP1-202ENST00000423945 ST6GALNAC4Q9H4F1 302 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms