RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 PIK3R2O00459 728 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 TMEM253P0C7T8 217 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 ACOT2P49753 483 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 ITGA8P53708 1063 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 TMEM154Q6P9G4 183 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 FOXR1Q6PIV2 292 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 ENOSF1Q7L5Y1 443 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 POLR3FQ9H1D9 316 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 BAZ2BQ9UIF8 2168 aaKnown RBP18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 MMP10P09238 476 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 ZBTB41Q5SVQ8 909 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 TTI2Q6NXR4 508 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 DNAJC9Q8WXX5 260 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 STAMBPL1Q96FJ0 436 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 OSBPL8Q9BZF1 889 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 SUN2Q9UH99 717 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 ZBTB17Q13105 803 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 DYNC1I2Q13409 638 aaKnown RBP18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 TPCN2Q8NHX9 752 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 FAM96AQ9H5X1 160 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 RNF146Q9NTX7 359 aa18.53■□□□□ 0.56
TRAPPC10-203ENST00000422875 GLI1P08151 1106 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 RASA1P20936 1047 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 KCNA3P22001 575 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 CDKAL1Q5VV42 579 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 TRIM72Q6ZMU5 477 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 RNF135Q8IUD6 432 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SH3GL3Q99963 347 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 BFARQ9NZS9 450 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SUCLA2Q9P2R7 463 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 KCNQ2O43526 872 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 ANXA13P27216 316 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 GPSM2P81274 684 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 RANBP17Q9H2T7 1088 aaKnown RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 DLGAP2Q9P1A6 1054 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 ARHGAP20Q9P2F6 1191 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 MAGEA4P43358 317 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 ARL13BQ3SXY8 428 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SBK1Q52WX2 424 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 GRAMD4Q6IC98 578 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 SNRNP48Q6IEG0 339 aaKnown RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 EPS8L3Q8TE67 593 aaKnown RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 NBPF3Q9H094 633 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 THAP2Q9H0W7 228 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 PABPC3Q9H361 631 aaKnown RBP18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 TRIM33Q9UPN9 1127 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 CHMP2BQ9UQN3 213 aa18.52■□□□□ 0.56
TRAPPC10-203ENST00000422875 INPP1P49441 399 aa18.52■□□□□ 0.55
TRAPPC10-203ENST00000422875 ATXN3P54252 364 aaPredicted RBP18.52■□□□□ 0.55
TRAPPC10-203ENST00000422875 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.55
TRAPPC10-203ENST00000422875 B2RBV5 119 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 NPR1P16066 1061 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 TAC1P20366 129 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 SMARCA1P28370 1054 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 SLC1A1P43005 524 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 PSPC1Q8WXF1 523 aaKnown RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 MTBPQ96DY7 904 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 RAB6BQ9NRW1 208 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ABCF3Q9NUQ8 709 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 SLC5A4Q9NY91 659 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZNF711Q9Y462 761 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 CHEK2O96017 543 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 PDHBP11177 359 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 C16orf87Q6PH81 154 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 UNC13BO14795 1591 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 AP1B1Q10567 949 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 MED21Q13503 144 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 FBXO25Q8TCJ0 367 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 OLFM3Q96PB7 478 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 FAM217BQ9NTX9 383 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZNF446Q9NWS9 450 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 DDX56Q9NY93 547 aaKnown RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZFATQ9P243 1243 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 GOLGA8CPA6NN73 597 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 E2F6O75461 281 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 GPC3P51654 580 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 LDHDQ86WU2 507 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 MTRQ99707 1265 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 CCDC90BQ9GZT6 254 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 CARD9Q9H257 536 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 FLT1P17948 1338 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 YWHABP31946 246 aaKnown RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 ARPP19P56211 112 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 LVRNQ6Q4G3 990 aa18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 PSMC3IPQ9P2W1 217 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC10-203ENST00000422875 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 CAND2O75155 1236 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 TARSP26639 723 aaKnown RBP18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 ACTR2P61160 394 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 NFX1Q12986 1120 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms