RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 KIAA1586Q9HCI6 787 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 FANCLQ9NW38 375 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 PCDHB7Q9Y5E2 793 aa17.08■□□□□ 0.32
DDX55-203ENST00000421670 IKBKBO14920 756 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 CAVIN2O95810 425 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 EOMESO95936 686 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 EPB41P11171 864 aaKnown RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 GATMP50440 423 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 SPAG1Q07617 926 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 GAS2L3Q86XJ1 694 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 HELQQ8TDG4 1101 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 GAD1Q99259 594 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 ELAC1Q9H777 363 aaKnown RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 TOPORSQ9NS56 1045 aaPredicted RBP17.07■□□□□ 0.32
DDX55-203ENST00000421670 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
DDX55-203ENST00000421670 TTC26A0AVF1 554 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 ARL5CA6NH57 179 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 BECN2A8MW95 431 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 SHHQ15465 462 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CCDC40Q4G0X9 1142 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 NLRC5Q86WI3 1866 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CREBRFQ8IUR6 639 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 FAM84AQ96KN4 292 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 MKNK1Q9BUB5 465 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 HSD3B7Q9H2F3 369 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 THAP9Q9H5L6 903 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 PDE11AQ9HCR9 933 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 GIT1Q9Y2X7 761 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 PTPRJQ12913 1337 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
DDX55-203ENST00000421670 SCNN1GP51170 649 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 BFSP1Q12934 665 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CDKAL1Q5VV42 579 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 LMBRD2Q68DH5 695 aaPredicted RBP17.06■□□□□ 0.32
DDX55-203ENST00000421670 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
DDX55-203ENST00000421670 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CNTN3Q9P232 1028 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 PLAGL2Q9UPG8 496 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
DDX55-203ENST00000421670 SMTNL1A8MU46 457 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 PTGESO14684 152 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 MAPK13O15264 365 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 OFD1O75665 1012 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 NFICP08651 508 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 TRIM49P0CI25 452 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 TRIM49CP0CI26 452 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 DLATP10515 647 aaKnown RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 DLG4P78352 724 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 PSMD6Q15008 389 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 JADE1Q6IE81 842 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 ALKAL1Q6UXT8 129 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 INTS8Q75QN2 995 aaKnown RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 EFCAB13Q8IY85 973 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 GSTCDQ8NEC7 633 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 ZMAT2Q96NC0 199 aaKnown RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 RPS6KC1Q96S38 1066 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 POP1Q99575 1024 aaKnown RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 MTIF3Q9H2K0 278 aaKnown RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
DDX55-203ENST00000421670 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
DDX55-203ENST00000421670 LRRIQ3A6PVS8 624 aaPredicted RBP17.04■□□□□ 0.32
DDX55-203ENST00000421670 KCNJ18B7U540 433 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 IL18RAPO95256 599 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 GNA14O95837 355 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 POMCP01189 267 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 ATP1A3P13637 1013 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 KRT13P13646 458 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
DDX55-203ENST00000421670 FRMD5Q7Z6J6 570 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 ABI1Q8IZP0 508 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 TMEM130Q8N3G9 435 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 PLEKHA5Q9HAU0 1116 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
DDX55-203ENST00000421670 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
DDX55-203ENST00000421670 DGKIO75912 1065 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
DDX55-203ENST00000421670 ZNF18P17022 549 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 VAMP7P51809 220 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 MARSP56192 900 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms