RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CD302Q8IX05 232 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 LPPQ93052 612 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 SLC35C1Q96A29 364 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 CCDC127Q96BQ5 260 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 CXCL16Q9H2A7 254 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 ASB7Q9H672 318 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 ELAC1Q9H777 363 aaKnown RBP13.56□□□□□ -0.24
TMEM53-206ENST00000420706 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 PDE11AQ9HCR9 933 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 TAB2Q9NYJ8 693 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 GIT1Q9Y2X7 761 aa13.56□□□□□ -0.24
TMEM53-206ENST00000420706 LRRIQ3A6PVS8 624 aaPredicted RBP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 AP5Z1O43299 807 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 IL18RAPO95256 599 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 FGBP02675 491 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 EPHB4P54760 987 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 CLDN10P78369 228 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 KCNH2Q12809 1159 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 MAN2A1Q16706 1144 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 XKR4Q5GH76 650 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 CRIPAKQ8N1N5 446 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 SNX27Q96L92 541 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 VPS16Q9H269 839 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 TMEM161AQ9NX61 479 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 KLK14Q9P0G3 267 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
TMEM53-206ENST00000420706 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 LTBP2Q14767 1821 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 ANK1P16157 1881 aa13.55□□□□□ -0.24
TMEM53-206ENST00000420706 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
TMEM53-206ENST00000420706 SERPINC1P01008 464 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TRIM49P0CI25 452 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TRIM49CP0CI26 452 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 DLATP10515 647 aaKnown RBP13.54□□□□□ -0.24
TMEM53-206ENST00000420706 ACTN1P12814 892 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
TMEM53-206ENST00000420706 PPP3CAQ08209 521 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 DCAF17Q5H9S7 520 aaPredicted RBP13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TMEM240Q5SV17 173 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TCERG1LQ5VWI1 586 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 USP37Q86T82 979 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 RSAD1Q9HA92 442 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 UBN1Q9NPG3 1134 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 CNTN3Q9P232 1028 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TRIP11Q15643 1979 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 CITO14578 2027 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
TMEM53-206ENST00000420706 TTC3P53804 2025 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 A0A1B0GTH6 734 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 EFCAB14O75071 495 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 OFD1O75665 1012 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 C4BPAP04003 597 aaKnown RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 TNNI1P19237 187 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 UBASH3AP57075 661 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 NR1I3Q14994 352 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 LMBRD2Q68DH5 695 aaPredicted RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 OTOP2Q7RTS6 562 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 EFCAB13Q8IY85 973 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 ZMAT2Q96NC0 199 aaKnown RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 GAD1Q99259 594 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 LBHD1Q9BQE6 289 aaPredicted RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 INTS13Q9NVM9 706 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
TMEM53-206ENST00000420706 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
TMEM53-206ENST00000420706 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms