RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 THP07101 528 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 CTSAP10619 480 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 YARSP54577 528 aaKnown RBP23.39■■□□□ 1.33
CPNE1-211ENST00000420363 DUSP6Q16828 381 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 SFR1Q86XK3 245 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 RNF135Q8IUD6 432 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 BICD1Q96G01 975 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 TCHPQ9BT92 498 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 FAM13BQ9NYF5 915 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 ANKFY1Q9P2R3 1169 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 MUTYHQ9UIF7 546 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 GDAQ9Y2T3 454 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 C5orf42Q9H799 3197 aa23.39■■□□□ 1.33
CPNE1-211ENST00000420363 TRIP11Q15643 1979 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 HNRNPDLO14979 420 aaKnown RBP23.38■■□□□ 1.33
CPNE1-211ENST00000420363 CLDN3O15551 220 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 EFEMP2O95967 443 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 OR1G1P47890 313 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 COASYQ13057 564 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 NAB2Q15742 525 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 XKR4Q5GH76 650 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 RNF168Q8IYW5 571 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-211ENST00000420363 CEP120Q8N960 986 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 MRPL43Q8N983 215 aaKnown RBP23.38■■□□□ 1.33
CPNE1-211ENST00000420363 LEO1Q8WVC0 666 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-211ENST00000420363 VN1R3Q9BXE9 311 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 PANK2Q9BZ23 570 aa23.38■■□□□ 1.33
CPNE1-211ENST00000420363 PRG3Q9Y2Y8 225 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-211ENST00000420363 TCHHQ07283 1943 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 PPP1R37O75864 691 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 LIG4P49917 911 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 AMPD3Q01432 767 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 HERC4Q5GLZ8 1057 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-211ENST00000420363 CNNM4Q6P4Q7 775 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 SMRP1Q8NCR6 262 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 ZBTB45Q96K62 511 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-211ENST00000420363 SNX27Q96L92 541 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 SPATA32Q96LK8 384 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 ACAP3Q96P50 834 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 PPP1R10Q96QC0 940 aaKnown RBP23.37■■□□□ 1.33
CPNE1-211ENST00000420363 HERC2P3Q9BVR0 1158 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 COLEC11Q9BWP8 271 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 SCAND2PQ9GZW5 306 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-211ENST00000420363 BARX2Q9UMQ3 279 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-211ENST00000420363 MUC6Q6W4X9 2439 aa23.37■■□□□ 1.33
CPNE1-211ENST00000420363 C2orf71A6NGG8 1288 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 HIDE1A8MVS5 230 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 PER2O15055 1255 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 SOD2P04179 222 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 NMT1P30419 496 aaKnown RBP23.36■■□□□ 1.33
CPNE1-211ENST00000420363 NUCB2P80303 420 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 ALCAMQ13740 583 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 KYAT1Q16773 422 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 ALKAL1Q6UXT8 129 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 ZNF720Q7Z2F6 126 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 ZBTB33Q86T24 672 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 DHX58Q96C10 678 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 STRA6Q9BX79 667 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 CNTN3Q9P232 1028 aa23.36■■□□□ 1.33
CPNE1-211ENST00000420363 GLP2RO95838 553 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 SRGAP2BP0DMP2 458 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 KCNC3Q14003 757 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 HSP90AA2PQ14568 343 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-211ENST00000420363 PTPN14Q15678 1187 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 ADALQ6DHV7 355 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 TMEM184AQ6ZMB5 413 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 GPR65Q8IYL9 337 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 MFSD14AQ96MC6 490 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 TRIM9Q9C026 710 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 MRPL44Q9H9J2 332 aaKnown RBP23.35■■□□□ 1.33
CPNE1-211ENST00000420363 ADAM28Q9UKQ2 775 aa23.35■■□□□ 1.33
CPNE1-211ENST00000420363 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-211ENST00000420363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-211ENST00000420363 POLR2DO15514 142 aaKnown RBP23.34■■□□□ 1.33
CPNE1-211ENST00000420363 HARSP12081 509 aaKnown RBP23.34■■□□□ 1.33
CPNE1-211ENST00000420363 KCNE1P15382 129 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 HFE2Q6ZVN8 426 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 CCDC65Q8IXS2 484 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 UROC1Q96N76 676 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 HAPLN2Q9GZV7 340 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 CXCL16Q9H2A7 254 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 SLC38A7Q9NVC3 462 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 SSX2IPQ9Y2D8 614 aa23.34■■□□□ 1.33
CPNE1-211ENST00000420363 USP15Q9Y4E8 981 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-211ENST00000420363 SMIM28A0A1B0GU29 152 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 TMEM189-UBE2V1I3L0A0 370 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 FAM189A1O60320 539 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 URODP06132 367 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 IDEP14735 1019 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 CMA1P23946 247 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 MATR3P43243 847 aaKnown RBP eCLIP23.33■■□□□ 1.33
CPNE1-211ENST00000420363 OSTNP61366 133 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 FUT10Q6P4F1 479 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 SLC39A4Q6P5W5 647 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 EDAQ92838 391 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 PLEKHA5Q9HAU0 1116 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 PANK4Q9NVE7 773 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 KCNH3Q9ULD8 1083 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 STYXL1Q9Y6J8 313 aa23.33■■□□□ 1.33
CPNE1-211ENST00000420363 SF3B1O75533 1304 aaKnown RBP eCLIP23.33■■□□□ 1.323e-7■■■■■ 90.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms